Abstract
In situ amplification techniques are designed to increase the mass of DNA in a fixed target, either whole cells or tissue sections. When combined with fluorescently labeled nucleotides, they can be used for locus detection. They also can be used to increase target mass for subsequent operations, such as cellular or chromosomal isolation by microdissection. When combined with chromosome microdissection, these techniques allow libraries to be made from single copies of chromosomes, chromosome fragments, or even bacteria.
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References
Guan, X. Y., Meltzer, P. S., Cao, J., and Trent, J. M. (1992) Rapid generation of region-specific genomic clones by chromosome microdissection: isolation of DNA from a region frequently deleted in malignant melanoma. Genomics 14, 680–684.
Engelen, J. J., Albrechts, J. C., Hamers, G. J., and Geraedts, J. P. (1998) A simple and efficient method for microdissection and microFISH. J. Med. Genet. 35, 265–268.
Frohlich, J., and Konig, H. (2000) New techniques for isolation of single prokaryotic cells. FEMS Microbiol. Rev. 24, 567–572.
Speel, E. J., Ramaekers, F. C., and Hopman, A. H. (2003) PCR-based detection of nucleic acids in chromosomes, cells, and tissues: technical considerations on PRINS and in situ PCR and comparison with in situ hybridization. Methods Mol. Biol. 226, 405–424.
Christian, A. T., Garcia, H. E., and Tucker, J. D. (1999) PCR in situ followed by microdissection allows whole chromosome painting probes to be made from single microdissected chromosomes. Mamm. Genome 10, 628–631.
Christian, A. T., Pattee, M. S., and Marchetti, F. (2002) Meiotic chromosomes as templates for microdissection. Chromosome Res. 10, 45–48.
Acknowledgment
This work was performed under the auspices of the US Department of Energy by University of California, Lawrence Livermore National Laboratory under Contract W-7405-Eng-48.
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© 2006 Humana Press Inc.
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Christian, A.T., Hara, C. (2006). Microdissection With PCR In Situ . In: Pellestor, F. (eds) PRINS and In Situ PCR Protocols. Methods in Molecular Biology™, vol 334. Humana Press. https://doi.org/10.1385/1-59745-068-5:161
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DOI: https://doi.org/10.1385/1-59745-068-5:161
Publisher Name: Humana Press
Print ISBN: 978-1-58829-549-1
Online ISBN: 978-1-59745-068-3
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