Abstract
The yeast Saccharomyces cerevisiae provides an excellent system to study genes of eukaryotes because it has been extensively characterized genetically and because the molecular mechanisms governing many cellular processes in yeasts are conserved in other organisms. For example, yeasts provide a powerful system for the study of mammalian proteins. However, to study the function of a cDNA encoding a heterologous protein in yeast, the cDNA needs to be cloned in an appropriate vector that permits expression, correct localization, and the posttranslational modification of the product. In this chapter we describe the yeast vectors available for analysis of a new gene and its product and provide two recommended transformation protocols.
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References
Lundblad, V. (1991) Yeast vector in Protocols in Molecular Biology (Ausubel, F. D., Brent, R. G., Kingston, R. E., Moore, D., Seidman, J. G., Smith, J. A., and Struhl, K., eds.), Wiley, New York, pp. 13.4.1.
Zealey, G. R., Goodey, A. R., Piggot, J. R., Watson, M. E., Cafferkey, R. C., Doel, S. M., Carter, B. L. A., and Wheals, A. E. (1988) Amplification of plasmid copy number by thymidine kinase expression in Saccharomyces cerevisiae. Mol. Gen. Genet. 211, 155–159.
Henderson, R. C. A., Cox, B. S., and Tubb, R. (1985) Transformation of brewing yeasts with a plasmid containing the gene for copper resistance. Curr. Genet. 9, 133–138.
Mortimer, R. K., Schild, C. R., Cantopolou, C. R., and Kans, J. A. (1989) Genetic map of Saccharomyces cerevisiae. Edition 10 Yeast 5, 321–329.
Gritz, L. and Davies, J. (1983) Plasmid-encoded hygromycin B resistance: the sequence of hygromycin B phosphotransferase gene and its expression in E. coli and Saccharomyces cerevisiae. Gene 25, 179–185.
Rine, J., Hansen, W., Hardeman, E., and Davis, R. W. (1983) Targeted selection of recombinant clones through gene dosage effects. Proc. Natl. Acad. Sci. USA 80, 6750–6754.
Brake, A. J. (1990) Alpha-factor leader-directed secretion of heterologous proteins from yeast. Methods Enzymol. 185, 408–421.
Hadfield, C., Cashmore, A. M., and Meacock, P. A. (1986) An efficient chloramphenicol-resistance marker for Saccharomyces cerevisiae. Gene 45, 149–155.
Sikorski, R. and Hieter, P. (1989) A system of shuttle vectors and host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics 122, 19–27.
Inomata, K., Nishikawa, M., and Yoshida, K. (1994) The Yeast Saccharomyces kluyveri as a recipient eukaryote in transkingdom conjugation: behavior of transmitted plasmids in transconjugants. J. Bacteriol. 176, 4770–4773.
Bender, A. and Pringle, J. (1991) Use of a synthetic lethal and multicopy suppressee mutants to identify two new genes involved in morphogenesis in Saccharomyces cerevisiae. Mol. Cell. Biol. 11, 1295–1305.
Cvrckova, F. and Naysmyt, K. (1993) Yeast G1 cyclins CLN1 and CLN2 and a GAP-like protein have a role in bud formation. EMBO 12, 5277–5286.
Kranz, J. and Holm, C. (1990) Cloning by function. An alternative approach for identifying yeast homologs of genes from other organisms. Proc. Natl. Acad. Sci. USA 87, 6629–6633.
Mylin, L. M., Hofmann, K. J., Schultz, L. D., and Hopper, J. E. (1990) Regulated GAL4 expression cassette providing controllable and high-level output from high-copy galactose promoters in yeast. Methods Enzymol. 185, 297–308.
Price, V. L., Taylor, W. E., Clevenger, W., Worthington, M., and Young, E. T. (1990) Expression of heterologous proteins in Saccharomyces cerevisiae using the ADH2 promoter. Methods Enzymol. 185, 308–318.
Etcheverry, T. (1990) Induced expression using yeast copper metallothionein promoter. Methods Enzymol. 185, 319–329.
Kingsman, S. M., Cousens, D., Stanway, C. A., Chambers, A., Wilson, M., and Kingsman, A. J. (1990) High efficiency yeast expression vectors based on the promoter of the phosphoglycerate kinase gene. Methods Enzymol. 185, 329–341.
Rosenberg, S., Coit, D., and Tekamp-Olson, P. Glyceraldehyde-3-phosphate dehydrogenase-derived expression cassettes for constitutive synthesis of heterologous proteins. Methods Enzymol. 185, 341–351.
Schena, M. and Yamamoto, K. R. (1988) Mammalian glucocorticoid receptor derivatives enhance transcription in yeast. Science 241, 965–967.
Picard, D., Schena, M., and Yamamoto, K. R. (1990) An inducible expression vector for both fission and budding yeast. Gene 86, 257–261.
Schena, M., Picard, D., and Yamamoto, K. R. (1991) Vectors for constitutive and inducible gene expression in yeast. Methods Enzymol. 194, 389–398.
Chien, C., Bartel, P. L., Sternglanz, R., and Fields, S. (1991) The two hybrid system a method to identify and clone genes for proteins that interact with a protein of interest. Proc. Nutl. Acad. Sci. USA 88, 9578–9582.
Touchette, N. (1991) New approach detects protein interactions in vivo. J. NIH Res. 3, 44–45.
Fields, S. (1993) The two hybrid system to detect protein-protein interactions. Methods 5, 116–124.
Finely, R. L. and Brent, R. G. Interaction trap cloning with yeast, in DNA Cloning-Expression System: A Practical Approach (Glover, D. and Hames, B. D., eds.), Oxford University Press, Oxford, England, in press.
Burke, D. T., Carle, G. F., and Olson, M. V. (1987) Cloning of a large segment of exogenous DNA in to yeast by means of artificial chromosones vectors. Science 236, 806–812.
Burke, D. T. and Olson, M. V. (1991) Preparation of clone libraries in yeast artificial chromosomes. Methods Enzymol. 194, 251–270.
Coulson, A., Kozono, Y., Lutterbach, B., Shownkeen, R., Sulston, J., and Watersion, R. (1991) YACs and the C. elegans genome. Bioessays 13, 3–417.
Little, R. D., Porta, G., Carle, G. F., Schlessinger, D., and D’Urso, M. (1989) Yeast artificial chromosones with 200-to 800-kilobase inserts of human DNA containing HLA, V kappa, 5s and Xq24-Xq28 sequences. Proc. Natl. Acad. Sci. USA 85, 98–1602.
Brownstein, B. H., Silverman, G. A., Little, R. D., Burke, D. T., Korsmeyer, S. J., Schlessinger, D., and Olson, M. V. (1989) Isolation of single-copy human genes from a library of yeast artificial chromosome clones. Science 244, 348–1351.
Hahnenbeger, K. M., Baum, M. P., Polizzi, D. M., Carbon, J., and Clarke, L. (1989) Construction of functional artificial minichromosones in the fission yeast Schizosaccharomyces pombe. Proc. Natl. Acad. Sci. USA 86, 577–581.
Jakobovits, A. (1994) Humanizing the mouse genome. Curr. Biol. 4, 761–763.
Kouprina, N., Eldarov, M., Moyzis, R., Resnick, M., and Larionov, V. (1994) A model system to assess the integrity of mammalian YACs during transformation and propagation in yeast. Genomics 21, 7–17.
Sleister, H. M., Mills, K. A., Blackwell, S. E., Killany, A. M., Murray, J. C., and Malone, R. E. (1992) Construction of a human chromosome 4 YAC pool and analysis of artificial chromosome stability. Nucleic Acids Res. 20, 3419–3425.
Heinemann, J. A. (1991) Genetics of gene transfer between species. Trend. Genet. 7, 181–185.
Lessl, M. and Lanka, E. (1994) Common mechanisms in bacterial conjugation and Ti-Mediated T-DNA transfer to plant cells. Cell 77, 321–324.
Heinemann, J. A. and Sprague, G. F. Jr. (1989) Bacterial conjugative plasmids mobilize DNA transfer between bacteria and yeast. Nature 340, 205–209.
Hayman, G. T. and Bolen, P. L. (1993) Movement of shuttle plasmids from Escherichia coli into yeasts other than Saccharomyces cerevisiae using trans-kingdom conjugation. Plasmid 30, 251–257.
Nishikawa, M., Suzuki, K., and Yoshida, K. (1990) Structural and functional stability of IncP plasmids during stepwise transmission by trans-kingdom mating. Promiscuous conjugation of Escherichia coli and Saccharomyces cerevisiae. Jpn. J. Genet 65, 323–334.
Heinemann, J. A. and Sprague, G. F. Jr. (1991) Transmission of plasmid DNA to yeast by conjugation with bacteria. Methods Enzymol. 194, 187–195.
Gurante, L. (1983) Yeast promoters and lacZ fusions designed to study expression of cloned genes in yeast. Methods Enzymol. 101, 181–191.
Camonis, J. H., Cassan, M., and Roussel, J.-P. (1990) Of mice and yeast versatile vectors which permit gene expression in both budding yeast and higher eukaryotic cells. Gene 86, 263–268.
Park, E. C., Finely, D., and Szostak, J. W. (1992) A strategy for the generation of conditional mutations by protein destabilization. Proc. Natl. Acad. Sci. USA 89, 1249–1252.
Kolodziej, P. A., and Young, R. A. (1991) Epitope tagging and protein surveillance. Methods Enzymol. 194, 508–519.
Pringle, J. R., Adams, A. E. M., Drubin, D. G., and Haarer, B. K. (1991) Immunofluorescence methods for yeast. Methods Enzymol. 194, 565–602.
Clark, M. (1991) Immunogold labeling of yeast ultrathin sections. Methods Enzymol. 194, 608–626.
Cullin, C. and Minvielle-Sebastia, L. (1994) Multipurpose vectors designed for the fast generation of N-or C-terminal epitope-tagged proteins. Yeast 10, 105–112.
Schiestl, R. H., Manivasakam, P., Woods, R. A., and Gietz, R. D. (1993) Introducing DNA into yeast by transformation. Methods 5, 79–85.
Manivasakam, P., and Schiestl, R. H. (1993) High efficiency transformation of Saccharomyces cerevisiae by electroporation. Nucleic Acids Res. 21, 4414–4415.
Rose, M. D., Winston, F., and Hieter, P. (1990) Methods in Yeast Genetics—A Laboratory Manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
Brzobohaty, B. and Kovac, L. (1986) Factors enhancing genetic transformation of intact yeast cells modify cell walls porosity. J. Gen. Microbiol. 132, 3089–3093.
Gietz, R. D., Weinberg, O., and Woods, R. A. (1992) Ultra high efficiency yeast transformation using the LiAc/ssDNA/PEG method. Yeast 8, S259.
Sherman, F. (1991) Getting started with yeast. Methods Enzymol. 194, 3–21.
Neumann, E., Schaefer-Ridder, M., Wang, Y., and Hofschneider, P. H. (1982) Gene transfer into mouse loyoma cells by electroporation in a high electrical field. EMBO 1, 841–845.
Dohmen, R. J., Srasser, A. W. M., Honer, C. B., and Hollenberg, C. P. (1991) An efficient transformation procedure enabling long term storage of competent cells of various genera. Yeast 7, 691–692.
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Singh, K.K., Heinemann, J.A. (1997). Yeast Plasmids. In: Tuan, R.S. (eds) Recombinant Gene Expression Protocols. Methods in Molecular Biology, vol 62. Humana Press. https://doi.org/10.1385/0-89603-480-1:113
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DOI: https://doi.org/10.1385/0-89603-480-1:113
Publisher Name: Humana Press
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