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Metabolomic Investigation of Methicillin-Resistant Staphylococcus aureus

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Methicillin-Resistant Staphylococcus Aureus (MRSA) Protocols

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1085))

Abstract

Metabolomics is becoming increasingly important as it provides a comprehensive analytical platform to better understand the biological functioning of a cell or organism. In recent years, microbial metabolomics has received much attention in research areas from new drug discovery to metabolic engineering. An efficient and accurate method to measure the intracellular metabolites of a specific microbial species is a key prerequisite for metabolome analysis. In this study, we describe a workflow focusing on the extraction and quantification of intracellular metabolites of Staphylococcus aureus. A filter-based bacteria sampling system was utilized to separate the media and bacteria; fast quenching with nitrogen was applied to prevent any metabolite leakage; a glass beads beater was used for intracellular metabolite extraction; and the LC-QTOF was combined to quantify the intracellular amino acids of S. aureus. This protocol is demonstrated to be an efficient method for analyzing the intracellular metabolites of S. aureus.

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References

  1. Nordmann P, Naas T, Fortineau N et al (2007) Superbugs in the coming new decade; multidrug resistance and prospects for treatment of Staphylococcus aureus, Enterococcus spp. and Pseudomonas aeruginosa in 2010. Curr Opin Microbiol 10:436–440

    Article  PubMed  CAS  Google Scholar 

  2. Kohler C, Wolff S, Albrecht D et al (2005) Proteome analyses of Staphylococcus aureus in growing and non-growing cells: a physiological approach. Int J Med Microbiol 295:547–565

    Article  PubMed  CAS  Google Scholar 

  3. Somerville GA, Proctor RA (2009) At the crossroads of bacterial metabolism and virulence factor synthesis in Staphylococci. Microbiol Mol Biol Rev 73:233–248

    Article  PubMed  CAS  Google Scholar 

  4. Koek MM, Muilwijk B, van der Werf MJ et al (2006) Microbial metabolomics with gas chromatography/mass spectrometry. Anal Chem 78:1272–1281

    Article  PubMed  CAS  Google Scholar 

  5. Liebeke M, Dorries K, Meyer H et al (2012) Metabolome analysis of gram-positive bacteria such as Staphylococcus aureus by GC-MS and LC-MS. Methods Mol Biol 815:377–398

    Article  PubMed  CAS  Google Scholar 

  6. Liebeke M, Meyer H, Donat S et al (2010) A metabolomic view of Staphylococcus aureus and its ser/thr kinase and phosphatase deletion mutants: involvement in cell wall biosynthesis. Chem Biol 17:820–830

    Article  PubMed  CAS  Google Scholar 

  7. Meyer H, Liebeke M, Lalk M (2010) A protocol for the investigation of the intracellular Staphylococcus aureus metabolome. Anal Biochem 401:250–259

    Article  PubMed  CAS  Google Scholar 

  8. Lei T, Yang J, Zheng L et al (2012) The essentiality of staphylococcal Gcp is independent of its repression of branched-chain amino acids biosynthesis. PLoS One 7:e46836

    Article  PubMed  CAS  Google Scholar 

  9. Jia S, Kang YP, Park JH et al (2011) Simultaneous determination of 23 amino acids and 7 biogenic amines in fermented food samples by liquid chromatography/quadrupole time-of-flight mass spectrometry. J Chromatogr 1218:9174–9182

    Article  CAS  Google Scholar 

  10. Walker JM (1997) The dansyl method for identifying N-terminal amino acids. Methods Mol Biol 64:189–195

    PubMed  CAS  Google Scholar 

  11. Shi X, Yao D, Chen C (2012) Identification of N-acetyltaurine as a novel metabolite of ethanol through metabolomics-guided biochemical analysis. J Biol Chem 287:6336–6349

    Article  PubMed  CAS  Google Scholar 

  12. Bolten CJ, Kiefer P, Letisse F et al (2007) Sampling for metabolome analysis of microorganisms. Anal Chem 79:3843–3849

    Article  PubMed  CAS  Google Scholar 

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Acknowledgements

This work was supported by grant AI057451 from the National Institute of Allergy and Infectious Diseases.

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Lei, T., Wang, L., Chen, C., Ji, Y. (2014). Metabolomic Investigation of Methicillin-Resistant Staphylococcus aureus . In: Ji, Y. (eds) Methicillin-Resistant Staphylococcus Aureus (MRSA) Protocols. Methods in Molecular Biology, vol 1085. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-62703-664-1_15

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  • DOI: https://doi.org/10.1007/978-1-62703-664-1_15

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  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-1-62703-663-4

  • Online ISBN: 978-1-62703-664-1

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