Skip to main content

Automated Grid Handling and Image Acquisition for Two-Dimensional Crystal Screening

  • Protocol
  • First Online:
Electron Crystallography of Soluble and Membrane Proteins

Part of the book series: Methods in Molecular Biology ((MIMB,volume 955))

Abstract

Routine large-scale two-dimensional (2D) crystallization trials are good candidates for automation. For imaging the large number of grids prepared from 2D crystallization trials, a two-pass imaging protocol using Leginon and a grid handling robot is described. A manual target selection bridges the two imaging passes. The two passes can be combined into one if objects of interests at different stages of trials can be reliably found using automated methods.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 139.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 179.00
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 249.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Cheng A, Leung A, Fellmann D, Quispe J, Suloway C, Pulokas J, Abeyrathne PD, Lam JS, Carragher B, Potter CS (2007) Towards automated screening of two-dimensional crystals. J Struct Biol 160:263–404

    Article  Google Scholar 

  2. Vink M, Derr K, Love J, Stokes DL, Ubarretxena-Belandia I (2007) A high-throughput strategy to screen 2D crystallization trials of membrane proteins. J Struct Biol 160:295–304

    Article  PubMed  CAS  Google Scholar 

  3. Coudray N, Hermann G, Caujolle-Bert D, Karathanou A, Erne-Brand F, Bruessler J-L, Daum P, Plitzko JM, Chami M, Mueller U, Kihl H, Urban J-P, Engel A, Remigy W (2010) Automated screening of 2D crystallization trials using transmission electron microscopy: a high-throughput tool-chain for sample preparation and microscopic analysis. J Struct Biol 173:365–374

    Article  PubMed  Google Scholar 

  4. Hu M, Vink M, Kim C, Derr K, Koss J, D’Amico K, Cheng A, Pulokas J, Ubarretxena-Belandia I, Stokes D (2010) Automated electron microscopy for evaluating two-dimensional crystallization of membrane proteins. J Struct Biol 171:102–110

    Article  PubMed  CAS  Google Scholar 

  5. Lefman J, Morrison R, Subramaniam S (2007) Automated 100-position specimen loader and image acquisition system for transmission electron microscopy. J Struct Biol 158:318–326

    Article  PubMed  Google Scholar 

  6. Potter CS, Pulokas J, Smith P, Suloway C, Carragher B (2004) Robotic grid loading ­system for a transmission electron microscope. J Struct Biol 146:431–440

    Article  PubMed  Google Scholar 

  7. Coudray N, Beck F, Buessler J, Karathanou A, Rémigy H, Kihl H, Engel A, Plitzko JM, Urban J (2008) Automatic acquisition and image analysis of 2D crystals. Microscopy Today 16:48–49

    Google Scholar 

  8. Nakamura N, Fujiyoshi Y, Mitsuoka K, Murata K, Shinkawa T (2003) An image evaluation system coupled with Auto-TEM. Microsc Microanal 9(Suppl 2):1038CD–1039CD

    Google Scholar 

  9. Glaeser RM, Lee J, Typke D (2006) Advantages and objectives of high-throughput data collection in single-particle cryo-EM. Microscopy and Microanalysis, Chicago

    Google Scholar 

Download references

Acknowledgments

This work is supported by National Institutes of Health (NIH) through the National Center for Research Resources (NCRR) P41 program (Grants RR17573 and RR023093). I would like to thank Bridget Carragher for valuable comments and editing of the manuscript.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Anchi Cheng .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2013 Springer Science+Business Media New York

About this protocol

Cite this protocol

Cheng, A. (2013). Automated Grid Handling and Image Acquisition for Two-Dimensional Crystal Screening. In: Schmidt-Krey, I., Cheng, Y. (eds) Electron Crystallography of Soluble and Membrane Proteins. Methods in Molecular Biology, vol 955. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-62703-176-9_16

Download citation

  • DOI: https://doi.org/10.1007/978-1-62703-176-9_16

  • Published:

  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-1-62703-175-2

  • Online ISBN: 978-1-62703-176-9

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics