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Single-Cell Culture in Microwells

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Single-Cell Analysis

Part of the book series: Methods in Molecular Biology ((MIMB,volume 853))

Abstract

In order to better understand cellular processes and behavior, a controlled way of studying high numbers of single cells and their clone formation is greatly needed. This chapter describes a microwell plate with 672 wells in a standard array/slide format, applied for single-cell culture and analysis. Single cells can be seeded into each well of the plate (1) manually or (2) automatically using a sorting flow cytometer, followed by week-long culture and detection of cell growth, protein expression, etc. The glass/silicon plate is compatible with most standard instrumentation to facilitate easy handling and enable use of the plate for single-cell analysis in most laboratory settings.

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References

  1. Spudich JL & Koshland DE, Jr. (1976) Non-genetic individuality: chance in the single cell. Nature 262(5568):467–471.

    Article  PubMed  CAS  Google Scholar 

  2. Templer RH & Ces O (2008) New frontiers in single-cell analysis. Journal of the Royal Society, Interface/the Royal Society 5 Suppl 2:S111-112.

    Google Scholar 

  3. Lindstrom S & Andersson-Svahn H (2011) Miniaturization of biological assays – overview on microwell devices for single-cell analyses. Biochim Biophys Acta 1810(3):308–316.

    Article  PubMed  Google Scholar 

  4. Di Carlo D & Lee LP (2006) Dynamic Single Cell Analysis for Quantitative Biology. Analytical chemistry 78(23):7918–7925.

    Article  PubMed  Google Scholar 

  5. Longo D & Hasty J (2006) Dynamics of single-cell gene expression. Molecular systems biology 2:64.

    Article  PubMed  Google Scholar 

  6. Sims CE & Allbritton NL (2007) Analysis of single mammalian cells on-chip. Lab on a chip 7(4):423–440.

    Article  PubMed  CAS  Google Scholar 

  7. Voldman J (2006) Engineered systems for the physical manipulation of single cells. Current opinion in biotechnology 17(5):532–537.

    Article  PubMed  CAS  Google Scholar 

  8. Lindstrom S & Andersson-Svahn H (2010) Overview of single-cell analyses: microdevices and applications. Lab on a chip 10(24):3363–3372.

    Article  PubMed  Google Scholar 

  9. Lindstrom S, Larsson R, & Svahn HA (2008) Towards high-throughput single cell/clone cultivation and analysis. Electrophoresis 29(6):1219–1227.

    Article  PubMed  Google Scholar 

  10. Lindstrom S, et al. (2009) High-Density Microwell Chip for Culture and Analysis of Stem Cells. PloS one 4(9):e6997.

    Article  PubMed  Google Scholar 

  11. Taylor LC & Walt DR (2000) Application of high-density optical microwell arrays in a live-cell biosensing system. Analytical biochemistry 278(2):132–142.

    Article  PubMed  CAS  Google Scholar 

  12. Chin VI, et al. (2004) Microfabricated platform for studying stem cell fates. Biotechnology and bioengineering 88(3):399–415.

    Article  PubMed  CAS  Google Scholar 

  13. Revzin A, Sekine K, Sin A, Tompkins RG, & Toner M (2005) Development of a microfabricated cytometry platform for characterization and sorting of individual leukocytes. Lab on a chip 5(1):30–37.

    Article  PubMed  CAS  Google Scholar 

  14. Rettig JR & Folch A (2005) Large-scale single-cell trapping and imaging using microwell arrays. Analytical chemistry 77(17):5628–5634.

    Article  PubMed  CAS  Google Scholar 

  15. Deutsch M, et al. (2006) A novel miniature cell retainer for correlative high-content analysis of individual untethered non-adherent cells. Lab on a chip 6(8):995–1000.

    Article  PubMed  CAS  Google Scholar 

  16. Tokimitsu Y, et al. (2007) Single lymphocyte analysis with a microwell array chip. Cytometry A 71(12):1003–1010.

    PubMed  Google Scholar 

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Correspondence to Sara Lindström .

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Lindström, S., Andersson-Svahn, H. (2012). Single-Cell Culture in Microwells. In: Lindström, S., Andersson-Svahn, H. (eds) Single-Cell Analysis. Methods in Molecular Biology, vol 853. Humana Press. https://doi.org/10.1007/978-1-61779-567-1_5

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  • DOI: https://doi.org/10.1007/978-1-61779-567-1_5

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  • Publisher Name: Humana Press

  • Print ISBN: 978-1-61779-566-4

  • Online ISBN: 978-1-61779-567-1

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