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Skeletal Muscle RNA Extraction in Preparation for RT-PCR

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RT-PCR Protocols

Part of the book series: Methods in Molecular Biology ((MIMB,volume 630))

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Abstract

Extraction of high quality RNA is paramount to successful RT-PCR, and here, a method proven optimal for skeletal muscle is described. While this method described is for use with skeletal muscle, it could be suitable for other types of mammalian tissue also. This method describes an approach to extract high quality RNA with minimal degradation and the subsequent analysis of that RNA in preparation for RT-PCR. Two separate methods of RNA quantification and analysis are described in this chapter and regardless of the method chosen for quantitation and analysis, it is imperative that the integrity of the sample be established before proceeding to RT-PCR.

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References

  1. Liedtke W, Battistini L, Brosnan CF, Raine CS (1994) A comparison of methods for RNA extraction from lymphocytes for RT-PCR. PCR Methods Appl 4:185-7

    Article  PubMed  CAS  Google Scholar 

  2. Imbeaud S, Graudens E, Boulanger V, Barlet X, Zaborski P, Eveno E, Mueller O, Schroeder A, Auffray C (2005) Towards stan­dar­dization of RNA quality assessment using user-independent classifiers of microcapillary electrophoresis traces. Nucleic Acids Res 33:e56

    Article  PubMed  Google Scholar 

  3. Fleige S, Walf V, Huch S, Prgomet C, Sehm J, Pfaffl MW (2006) Comparison of relative mRNA quantification models and the impact of RNA integrity in quantitative real-time RT-PCR. Biotechnol Lett 28:1601-13

    Article  PubMed  CAS  Google Scholar 

  4. Fleige S, Pfaffl MW (2006) RNA integrity and the effect on the real-time qRT-PCR performance. Mol Aspects Med 27:126-39

    Article  PubMed  CAS  Google Scholar 

  5. Schroeder A, Mueller O, Stocker S, Salowsky R, Leiber M, Gassmann M, Lightfoot S, Menzel W, Granzow M, Ragg T (2006) The RIN: an RNA integrity number for assigning integ­rity values to RNA measurements. BMC Mol Biol 7:3

    Article  PubMed  Google Scholar 

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Acknowledgments

Thanks to Dr. Robyn M. Murphy and Heidy Latchman for their helpful feedback on the preparation and content of this document.

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Correspondence to Janelle P. Mollica .

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© 2010 Springer Science+Business Media, LLC

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Mollica, J.P. (2010). Skeletal Muscle RNA Extraction in Preparation for RT-PCR. In: King, N. (eds) RT-PCR Protocols. Methods in Molecular Biology, vol 630. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-60761-629-0_16

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  • DOI: https://doi.org/10.1007/978-1-60761-629-0_16

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  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-1-60761-628-3

  • Online ISBN: 978-1-60761-629-0

  • eBook Packages: Springer Protocols

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