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Pulsed-Field Gel Electrophoresis of Salmonella enterica

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Pulse Field Gel Electrophoresis

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1301))

Abstract

Pulsed-field gel electrophoresis (PFGE) is considered a “gold standard” for the molecular characterization of a number of bacterial strains. Its strength relies on its high discriminatory power, together with its high reproducibility. For many years, an international network, PulseNet International, allows the rapid comparison of PFGE data obtained all over the world, and it provides a valuable tool to promptly recognize the epidemiological dynamics of many pathogens, including Salmonella enterica. Here we describe the laboratory procedure to perform the standardized protocol for the PFGE typing of S. enterica strains.

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References

  1. Schwartz DC, Cantor CR (1984) Separation of yeast chromosome-sized DNAs by pulsed field gradient gel electrophoresis. Cell 37:67–75

    Article  CAS  PubMed  Google Scholar 

  2. Olive DM, Bean P (1999) Principles and applications of methods for DNA-based typing of microbial organisms. J Clin Microbiol 37:1661–1669

    CAS  PubMed Central  PubMed  Google Scholar 

  3. Cho S, Boxrud DJ, Bartkus JM, Whittam TS, Saeed M (2007) Multiple-locus variable-number tandem repeat analysis of Salmonella Enteritidis isolates from human and non-human sources using a single multiplex PCR. FEMS Microbiol Lett 275:163–23

    Google Scholar 

  4. Torpdahl M, Sørensen G, Lindstedt BA, Nielsen EM (2007) Tandem repeat analysis for surveillance of human Salmonella Typhimurium infections. Emerg Infect Dis 13:388–395

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  5. Wattiau P, Boland C, Bertrand S (2011) Methodologies for Salmonella enterica subsp. enterica subtyping: gold standards and alternatives. Appl Environ Microbiol 77:7877–7885

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  6. Struelens m, Members of the European Study Group on Epidemiological Markers (ESGEM) of the European Society for Clinical Microbiology and Infectious Diseases (ESCMID) (2007) Consensus guidelines for appropriate use and evaluation of microbial epidemiologic typing systems. Clin Microbiol Infect 2:2–11

    Article  Google Scholar 

  7. Zou W, Chen HC, Hise KB, Tang H, Foley SL, Meehan J, Lin WJ, Nayak R, Xu J, Fang H, Chen JJ (2013) Meta-analysis of pulsed-field gel electrophoresis fingerprints based on a constructed Salmonella database. PLoS One 8:e59224

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  8. http://www.cdc.gov/globalhealth/programs/pulsenet.htm, latest Accessed on March 25th, 2014.

  9. Hunter SB, Vauterin P, Lambert-Fair MA, Van Duyne MS, Kubota K, Graves L, Wrigley D, Barrett T, Ribot E (2005) Establishment of a universal size standard strain for use with the PulseNet standardized pulsed-field gel electrophoresis protocols: converting the national databases to the new size standard. J Clin Microbiol 43:1045–1050

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  10. Nair S, Karim R, Cardosa MJ, Ismail G, Pang T (1999) Convenient and versatile DNA extraction using agarose plugs for ribotyping of problematic bacterial species. J Microbiol Methods 38:63–67

    Article  CAS  PubMed  Google Scholar 

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Correspondence to Antonio Camarda .

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Camarda, A., Circella, E., Pupillo, A., Legretto, M., Marino, M., Pugliese, N. (2015). Pulsed-Field Gel Electrophoresis of Salmonella enterica . In: Jordan, K., Dalmasso, M. (eds) Pulse Field Gel Electrophoresis. Methods in Molecular Biology, vol 1301. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-2599-5_16

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  • DOI: https://doi.org/10.1007/978-1-4939-2599-5_16

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-2598-8

  • Online ISBN: 978-1-4939-2599-5

  • eBook Packages: Springer Protocols

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