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Differential Effects of Overexpression of Rab5 and Rab22 on Autophagy in PC12 Cells with or without NGF

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Rab GTPases

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1298))

Abstract

Macroautophagy selectively recycles damaged or unneeded proteins and organelles by degradation via targeting to the autophagosome. The following method seeks to identify candidate Rab GTPases that likely modulate autophagy in PC12 cells during nerve growth factor (NGF) starvation. This microscopy-based assay is a single cell-based quantification of the presence of autophagosomes by fluorescently labeled markers in response to the overexpression of Rabs and mutants in the presence or absence of NGF.

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References

  1. Mizushima N (2007) Autophagy: process and function. Genes Dev 21:2861–2873

    Article  CAS  PubMed  Google Scholar 

  2. Lee J-A (2012) Neuronal autophagy: a housekeeper or a fighter in neuronal cell survival? Exp Neurobiol 21:1–8

    Article  PubMed Central  PubMed  Google Scholar 

  3. Huang EJ, Reichardt LF (2003) Trk receptors: roles in neuronal signal transduction. Annu Rev Biochem 72:609–642

    Article  CAS  PubMed  Google Scholar 

  4. Hosokawa N, Hara T, Kaizuka T, Kishi C, Takamura A, Miura Y, Iemura S, Natsume T, Takehana K, Yamada N, Guan JL, Oshiro N, Mizushima N (2009) Nutrient-dependent mTORC1 association with the ULK1-Atg13-FIP200 complex required for autophagy. Mol Biol Cell 20:1981–1991

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  5. Chua C, Gan B, Tang B (2011) Involvement of members of the Rab family and related small GTPases in autophagosome formation and maturation. Cell Mol Life Sci 68:3349–3358

    Article  CAS  PubMed  Google Scholar 

  6. Wang L, Liang Z, Li G (2011) Rab22 controls NGF signaling and neurite outgrowth in PC12 cells. Mol Biol Cell 22:3853–3860

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  7. Sheen JH, Zoncu R, Kim D, Sabatini DM (2011) Defective regulation of autophagy upon leucine deprivation reveals a targetable liability of human melanoma cells. Cancer Cell 19:613–628

    Article  PubMed Central  CAS  PubMed  Google Scholar 

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Acknowledgment

The authors’ research program is supported by the NIH/NIGMS grant R01 GM074692 (to G.L.).

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Correspondence to Guangpu Li .

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© 2015 Springer Science+Business Media New York

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Marlin, M.C., Li, G. (2015). Differential Effects of Overexpression of Rab5 and Rab22 on Autophagy in PC12 Cells with or without NGF. In: Li, G. (eds) Rab GTPases. Methods in Molecular Biology, vol 1298. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-2569-8_25

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  • DOI: https://doi.org/10.1007/978-1-4939-2569-8_25

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-2568-1

  • Online ISBN: 978-1-4939-2569-8

  • eBook Packages: Springer Protocols

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