Skip to main content

Structural Differences of Chromosomes in Plants Detected by Fluorescence in situ Hybridization Using Probes of rDNA, Arabidopsis-type Telomere Sequence Repeats and pCrT7-4

  • Chapter
Some Aspects of Chromosome Structure and Functions

Abstract

The chromosomal sites of 5S rDNA, 45S rDNA and Arabidopsis-iypt telomere sequence repeats characterize individual species and population constitutions in chrysanthemums and cycads and those of Sau3A in spruces. The sites of the telomere sequence repeats in the cycad chromosomes occur not only in the usual terminal regions of chromosome-arms as small dots, but also in several centromeric to proximal regions as relatively large signals. Large signals of the 278 bp DNA segment with respect to Cycas revoluta involved with pCrT7-4. The Y-chromosome of Cycas revoluta was distinct by lack of the large signal of pCrT7-4 and the Arabidopsis-type telomere sequence repeats. A highly conserved chromosomal location of these genes lead to speculation on the karyotype evolution and species property of the chrysanthemum and cycad groups.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 129.00
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  • Alonso-Blanco, C., PendaS, A.M., Garcia-Suarez, R., Roca, A., Goicoechea, P.G. and Giraidez, R. (1994) Physical mapping of 5S rDNA reveals a new locus on 3R and unexpected complexity in a rye translocation used in chromosome mapping. Chromosoma (Berl.) 103: 331-337.

    Article  CAS  Google Scholar 

  • Brown, G.R., Newton, C.H. and Carlson, J.E. (1998) Organization and distribution of a Sau3A tandem repeated DNA sequence in Picea (Pinaceae) species. Genome 41: 560-565.

    PubMed  CAS  Google Scholar 

  • Charlesworth, B., Sniegowski P and StephanW (1994) The evolutionary dynamics of repetitive DNA in eukaryotes. Nature 371 : 215-220.

    Article  PubMed  CAS  Google Scholar 

  • Cox, A.V., Bennett, S.T., Parokonny, A.S., Kenton, A, Callimassia, M.A. and Bennett, M.D. (1993) Comparison of plant telomere locations using PCR-generated synthetic probe. Ann. Bot. 72: 239-247.

    Article  CAS  Google Scholar 

  • Doolittle, W.F. and Sapienza, C. (1980) Selfish genes, the phenotype paradigm and genome evolution. Nature 284: 111-117.

    Article  Google Scholar 

  • Flavell, R. (1980) Repetitive DNA and chromosome evolution in plants. Annual Rev. Plant Physiol. 31: 569- 596.

    Article  CAS  Google Scholar 

  • Fuchs, J., Brandes A and Schubert I (1995) Telomere sequence localization and karyotype evolution in higher plants. P.l. Syst. Evol. 196: 227-241.

    Article  CAS  Google Scholar 

  • Furuta, T. and Kondo, K. (1990) Sites of 18S-5.8S-26S rDNA sequences in diffused centromeric chromosomes of Drosera falconerii. Chromosome Sci. 3: 69-73.

    Google Scholar 

  • Galasso, 1., Saponetti, L.S. and Pignone, D. (1998) Cytotaxonomic studies in Vigna. IV. Variation of the number of active and silent rDNA sites in Vigna unguiculata populations. Caryologia 51 : 95-104.

    Google Scholar 

  • Gerlach, W.L. and Bedbrook, J.R. (1979) Cloning and characterization of ribosomal RNA genes from wheat and barley. Nucl. Acids. Res. 7: 1869-1885.

    Article  PubMed  CAS  Google Scholar 

  • Hizume, M., Ishida, F. and Kondo, K. (1992) Differential staining and in situ hybridization of nucleolar organizers and centromeres in Cycas revoluta chromosomes. Jpn J Genet 67: 381-387.

    Article  CAS  Google Scholar 

  • Hizume, M., Kurose, N., Shibata, F. and Kondo, K. (1998) Molecular cytogenetic studies on sex chromosomes and proximal heterochromatin containing telomere-like sequence in Cycas revoluta. Chromosome Sci. 2: 63- 72.

    CAS  Google Scholar 

  • Hizume, M., Shibata, F., Kondo, K., Hoshi, Y., Kondo, T., Ge, S., Yang, Q. and Hong, D. (1999) Identification of chromosomes in two Chinese spruce species by multicolor fluorescence in situ hybridization. Chromosome Sci 3: 37-41.

    Google Scholar 

  • Honda, Y., Abd El-Twab, M.H., Ogura, H., Kondo, K., Tanaka, R. and Shidahara, T. (1997) Counting satchromosome numbers and species characterization in wild species of Chrysanthemum sensu lato by fluorescent in situ hybridization using pTa 71 probe. Chromosome Sci 1: 77-81.

    Google Scholar 

  • Kawakami, S.M., Kondo, K. and Kawakami, S. (1999) Analysis of nucleolar organizer constitution by fluorescent in situ hybridization (FISH) in diploid and artificially produced haploid sporophytes of the fern Osmunda japonica (Osumundaceae). Pl Dyst. Evol. 216: 325-331.

    Article  Google Scholar 

  • Khaung, K.K., Kondo, K. and Tanaka, R. (1997) Physical mapping of rDNA by fluorescent in situ hybridization using pTa71 probe in three tetraploid species of Dendranthema. Chromosome Sci. 1: 25-30.

    CAS  Google Scholar 

  • Kokubugata, G. and Kondo, K. (1998) Comparative karyotype analysis of Ceratozamia mexicana and Microcycas calocoma (Zamiaceae) using fluorochrome banding (CMA/DAPI) and fluorescence in situ hybridization of ribosomal DNA. Pl Syst. Evol. 210: 41-50.

    Article  Google Scholar 

  • Kondo, K., Honda, Y. and Tanaka, R. (1996a) Chromosome marking in Dendranthema japonicum var. wakasaense and its closely related species by fluorescence in situ hybridization using rDNA probe pTa71. La Kromosomo II-81: 2785-2791.

    Google Scholar 

  • Kondo, K., Kokubugata, G. and Honda, Y. (1996b) Marking and identification of certain chromosomes in wild chrysanthemums and cycads by fluorescence in situ hybridization using pTa71 rDNA probe. Genet. Pol. 37A: 24-26.

    Google Scholar 

  • Kondo, K. and Tagashira, N. (1998) Regions in situ-hybridization by the Arabidopsis type telomere sequence repeats in Zamia chromosomes. Chromosome Sci 2: 87-89.

    CAS  Google Scholar 

  • Lubaretz, O., Fuchs, J., Ahno, R., Meister A and Schubert I (1996) Karyotyping of three Pinaceae species via fluorescent in situ hybridization and computer-aided chromosome analysis. Theor Appl Genet 92: 411-416.

    Article  Google Scholar 

  • Matsuyama, T., Akihama, T., lto Y., Omura, M. and Fukui, K. (1996) Characterization of heterochromatic regions in 'Trovita' orange (Citrus sinensis Osbeck) chromosomes by the fluorescent staining and FISH methods. Genome 39: 941-945.

    Article  PubMed  CAS  Google Scholar 

  • Schmidt, T., Schwarzacher, T. and Hesiop-Harrison, J.S. (1994) Physical mapping of rRNA genes by fluorescent in situ hybridization and structural analysis of 5S rRNA genes and intergenic spacer sequences in sugar beet (Beta vulgaris). Theor Appl genet 88: 629-636.

    Article  CAS  Google Scholar 

  • Tagashira, N. and Kondo, K. (2000) Chromosome phylogeny of aneuploid Zamia and its closely related Ceratozamia by mean of centric fission and fusion detected by using fluorescence in situ hybridization of ribosomal DNA. Pl Syst Evol. in press.

    Google Scholar 

  • Thomas, H.M., Harper, J.A., Meredith, M.R., Morgan ,W.G., Thomas, I.D., Timms, E. and King, I.P. (1996) Comparison of ribosomal DNA sites in Lolium species by fluorescence in situ hybridization. Chromosome Res 4: 486-490.

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2002 Narosa Publishing House, New Delhi, India

About this chapter

Cite this chapter

Kondo, K. et al. (2002). Structural Differences of Chromosomes in Plants Detected by Fluorescence in situ Hybridization Using Probes of rDNA, Arabidopsis-type Telomere Sequence Repeats and pCrT7-4. In: Sobit, R.C., Obe, G., Athwal, R.S. (eds) Some Aspects of Chromosome Structure and Functions. Springer, Dordrecht. https://doi.org/10.1007/978-94-010-0334-6_4

Download citation

  • DOI: https://doi.org/10.1007/978-94-010-0334-6_4

  • Publisher Name: Springer, Dordrecht

  • Print ISBN: 978-0-7923-7057-4

  • Online ISBN: 978-94-010-0334-6

  • eBook Packages: Springer Book Archive

Publish with us

Policies and ethics