Abstract
It is becoming progressively more understandable that miRNA subsets regulate post-transcriptional processing of modulators of wide ranging cellular mechanisms. There are visible knowledge gaps related to current comprehensions about protein network that ultimately regulates decisions of DNA damage repair and apoptosis. Although evidence, in general, is sparse and fragmentary, merging knowledge links TRAIL mediated signaling, DNA damage repair and miRNA control of both of these processes as functional pathways having a key role in cell growth arrest, DNA repair and death. Methodological and technical advancements over the last decade have helped to reveal that these pathways may act in concert and there is a need to explore multiple mechanisms in parallel. Data obtained through high throughput technologies is deepening our understanding regarding miRNA regulation of DNA damage repair proteins. Moreover, confluence of information suggests that miRNAs are triggered by ATM as well as in genomically rearranged cancer cells, there is a notable alteration in expression of different miRNAs. Studies in this rapidly emerging area have started to address miRNA regulation and transportation of pre-miRNAs from nucleus to cytoplasm by ATM. Surprisingly, ATM has diametrically opposed roles in regulating TRAIL mediated apoptosis in cancer cells. In addition receptors of TRAIL had previously been reported to be regulated by ATM/p53 signaling axis. Therefore it will be interesting to study how miRNA mediated negative control of ATM influences death receptors and TRAIL mediated signaling. New technologies for identification of a larger subset of miRNA involved in modulation of regulators of DNA damage signaling and layered regulation of miRNAs by ATM and genomic rearrangements will surely help in catalyzing the transit from a segmented view of control of DNA damage repair modulators by miRNA to a conceptual continuum. Considerably improved information of these integrated pathways is essential in getting a step closer to personalized medicine.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Bhatti S, Kozlov S, Farooqi AA, Naqi A, Lavin M, Khanna KK (2011) ATM protein kinase: the linchpin of cellular defenses to stress. Cell Mol Life Sci 68(18):2977–3006
Shiloh Y, Ziv Y (2013) The ATM protein kinase: regulating the cellular response to genotoxic stress, and more. Nat Rev Mol Cell Biol 14(4):197–210
Cortez MA, Ivan C, Zhou P, Wu X, Ivan M, Calin GA (2010) microRNAs in cancer: from bench to bedside. Adv Cancer Res 108:113–157
Garzon R, Calin GA, Croce CM (2009) MicroRNAs in cancer. Annu Rev Med 60:167–179
Wan G, Zhang X, Langley RR, Liu Y, Hu X, Han C, Peng G, Ellis LM, Jones SN, Lu X (2013) DNA-Damage-Induced Nuclear Export of Precursor MicroRNAs Is Regulated by the ATM-AKT Pathway. Cell Rep pii: S2211–1247(13)00271–4
Huang Y, Chuang AY, Ratovitski EA (2011) Phospho-ΔNp63α/miR-885-3p axis in tumor cell life and cell death upon cisplatin exposure. Cell Cycle 10(22):3938–3947
Huang Y, Chuang A, Hao H, Talbot C, Sen T, Trink B, Sidransky D, Ratovitski E (2011) Phospho-ΔNp63α is a key regulator of the cisplatin-induced microRNAome in cancer cells. Cell Death Differ 18(7):1220–1230
Saleh AD, Savage JE, Cao L, Soule BP, Ly D, DeGraff W, Harris CC, Mitchell JB, Simone NL (2011) Cellular stress induced alterations in microRNA let-7a and let-7b expression are dependent on p53. PLoS One 6(10):e24429
Martin NT, Nakamura K, Davies R, Nahas SA, Brown C, Tunuguntla R, Gatti RA, Hu H (2013) ATM-dependent MiR-335 targets CtIP and modulates the DNA damage response. PLoS Genet 9(5):e1003505
Hesse JE, Liu L, Innes CL, Cui Y, Palii SS, Paules RS (2013) Genome-wide small RNA sequencing and gene expression analysis reveals a microRNA Profile of cancer susceptibility in ATM-deficient human mammary epithelial cells. PLoS One 8(5):e64779
Bisso A, Faleschini M, Zampa F, Capaci V, De Santa J, Santarpia L, Piazza S, Cappelletti V, Daidone M, Agami R, Del Sal G (2013) Oncogenic miR-181a/b affect the DNA damage response in aggressive breast cancer. Cell Cycle 12(11):1679–1687
Wang Y, Yu Y, Tsuyada A, Ren X, Wu X, Stubblefield K, Rankin-Gee EK, Wang SE (2011) Transforming growth factor-β regulates the sphere-initiating stem cell-like feature in breast cancer through miRNA-181 and ATM. Oncogene 30(12):1470–1480
Lin F, Li R, Pan ZX, Zhou B, de Yu B, Wang XG, Ma XS, Han J, Shen M, Liu HL (2012) MiR-26b promotes granulosa cell apoptosis by targeting ATM during follicular atresia in porcine ovary. PLoS One 7(6):e38640
Ng WL, Yan D, Zhang X, Mo YY, Wang Y (2010) Over-expression of miR-100 is responsible for the low-expression of ATM in the human glioma cell line: M059J. DNA Repair (Amst) 9(11):1170–1175
Brunner S, Herndler-Brandstetter D, Arnold CR, Wiegers GJ, Villunger A, Hackl M, Grillari J, Moreno-Villanueva M, Bürkle A, Grubeck-Loebenstein B (2012) Upregulation of miR-24 is associated with a decreased DNA damage response upon etoposide treatment in highly differentiated CD8(+) T cells sensitizing them to apoptotic cell death. Aging Cell 11(4):579–587
Shen C, Houghton PJ (2013) The mTOR pathway negatively controls ATM by up-regulating miRNAs. Proc Natl Acad Sci U S A 110:11869–11874
Wu CW, Dong YJ, Liang QY, He XQ, Ng SS, Chan FK, Sung JJ, Yu J (2013) MicroRNA-18a attenuates DNA damage repair through suppressing the expression of ataxia telangiectasia mutated in colorectal cancer. PLoS One 8(2):e57036. doi:10.1371/journal.pone.0057036
Guo X, Yang C, Qian X, Lei T, Li Y, Shen H, Fu L, Xu B (2013) Estrogen receptor α regulates ATM Expression through miRNAs in breast cancer. Clin Cancer Res 19(18):4994–5002
Chang L, Hu W, Ye C, Yao B, Song L, Wu X, Ding N, Wang J, Zhou G (2012) MiR-3928 activates ATR pathway by targeting Dicer. RNA Biol 9(10):1247–1254
Wang J, He J, Su F, Ding N, Hu W, Yao B, Wang W, Zhou G (2013) Repression of ATR pathway by miR-185 enhances radiation-induced apoptosis and proliferation inhibition. Cell Death Dis 4:e699
Garcia AI, Buisson M, Bertrand P, Rimokh R, Rouleau E, Lopez BS, Lidereau R, Mikaélian I, Mazoyer S (2011) Down-regulation of BRCA1 expression by miR-146a and miR-146b-5p in triple negative sporadic breast cancers. EMBO Mol Med 3(5):279–290
Krishnan K, Steptoe AL, Martin HC, Wani S, Nones K, Waddell N, Mariasegaram M, Simpson PT, Lakhani SR, Gabrielli B, Vlassov A, Cloonan N, Grimmond SM (2013) MicroRNA-182-5p targets a network of genes involved in DNA repair. RNA 19(2):230–242. doi:10.1261/rna.034926.112
Wang Y, Huang JW, Calses P, Kemp CJ, Taniguchi T (2012) MiR-96 downregulates REV1 and RAD51 to promote cellular sensitivity to cisplatin and PARP inhibition. Cancer Res 72(16):4037–4046
Wang Y, Huang JW, Li M, Cavenee WK, Mitchell PS, Zhou X, Tewari M, Furnari FB, Taniguchi T (2011) MicroRNA-138 modulates DNA damage response by repressing histone H2AX expression. Mol Cancer Res 9(8):1100–1111
Mueller AC, Sun D, Dutta A (2013) The miR-99 family regulates the DNA damage response through its target SNF2H. Oncogene 32(9):1164–1172
Zhang X, Wan G, Mlotshwa S, Vance V, Berger FG, Chen H, Lu X (2010) Oncogenic Wip1 phosphatase is inhibited by miR-16 in the DNA damage signaling pathway. Cancer Res 70(18):7176–7186
de Oliveira PE, Zhang L, Wang Z, Lazo JS (2009) Hypoxia-mediated regulation of Cdc25A phosphatase by p21 and miR-21. Cell Cycle 8(19):3157–3164
Pothof J, Verkaik NS, van IJcken W, Wiemer EA, Ta VT, van der Horst GT, Jaspers NG, van Gent DC, Hoeijmakers JH, Persengiev SP (2009) MicroRNA-mediated gene silencing modulates the UV-induced DNA-damage response. EMBO J 28(14):2090–9
Cannell IG, Kong YW, Johnston SJ, Chen ML, Collins HM, Dobbyn HC, Elia A, Kress TR, Dickens M, Clemens MJ, Heery DM, Gaestel M, Eilers M, Willis AE, Bushell M (2010) P38 MAPK/MK2-mediated induction of miR-34c following DNA damage prevents Myc-dependent DNA replication. Proc Natl Acad Sci U S A 107(12):5375–5380
Farooqi AA, Nawaz A, Javed Z, Bhatti S, Ismail M (2013) While at Rome miRNA and TRAIL do whatever BCR-ABL commands to do. Arch Immunol Ther Exp (Warsz) 61(1):59–74
Fayyaz S, Farooqi AA (2013) MiRNA and TMPRSS2-ERG do not mind their own business in prostate cancer cells. Immunogenetics 65(5):315–332
Chen JM, Cooper DN, Férec C, Kehrer-Sawatzki H, Patrinos GP (2010) Genomic rearrangements in inherited disease and cancer. Semin Cancer Biol 20(4):222–233
Robin TP, Smith A, McKinsey E, Reaves L, Jedlicka P, Ford HL (2012) EWS/FLI1 regulates EYA3 in Ewing sarcoma via modulation of miRNA-708, resulting in increased cell survival and chemoresistance. Mol Cancer Res 10(8):1098–1108
McKinsey EL, Parrish JK, Irwin AE, Niemeyer BF, Kern HB, Birks DK, Jedlicka P (2011) A novel oncogenic mechanism in Ewing sarcoma involving IGF pathway targeting by EWS/Fli1-regulated microRNAs. Oncogene 30(49):4910–4920
Jiang X, Huang H, Li Z, He C, Li Y, Chen P, Gurbuxani S, Arnovitz S, Hong GM, Price C, Ren H, Kunjamma RB, Neilly MB, Salat J, Wunderlich M, Slany RK, Zhang Y, Larson RA, Le Beau MM, Mulloy JC, Rowley JD, Chen J (2012) MiR-495 is a tumor-suppressor microRNA down-regulated in MLL-rearranged leukemia. Proc Natl Acad Sci U S A 109(47):19397–19402
Nishi M, Eguchi-Ishimae M, Wu Z, Gao W, Iwabuki H, Kawakami S, Tauchi H, Inukai T, Sugita K, Hamasaki Y, Ishii E, Eguchi M (2013) Suppression of the let-7b microRNA pathway by DNA hypermethylation in infant acute lymphoblastic leukemia with MLL gene rearrangements. Leukemia 27(2):389–397
Stumpel DJ, Schotte D, Lange-Turenhout EA, Schneider P, Seslija L, de Menezes RX, Marquez VE, Pieters R, den Boer ML, Stam RW (2011) Hypermethylation of specific microRNA genes in MLL-rearranged infant acute lymphoblastic leukemia: major matters at a micro scale. Leukemia 5(3):429–439
Schneider B, Nagel S, Ehrentraut S, Kaufmann M, Meyer C, Geffers R, Drexler HG, MacLeod RA (2012) Neoplastic MiR-17 92 deregulation at a DNA fragility motif (SIDD). Genes Chromosome Cancer 51(3):219–228
Li Z, Lu J, Sun M, Mi S, Zhang H, Luo RT, Chen P, Wang Y, Yan M, Qian Z, Neilly MB, Jin J, Zhang Y, Bohlander SK, Zhang DE, Larson RA, Le Beau MM, Thirman MJ, Golub TR, Rowley JD, Chen J (2008) Distinct microRNA expression profiles in acute myeloid leukemia with common translocations. Proc Natl Acad Sci U S A 105(40):15535–15540
Schotte D, Lange-Turenhout EA, Stumpel DJ, Stam RW, Buijs-Gladdines JG, Meijerink JP, Pieters R, Den Boer ML (2010) Expression of miR-196b is not exclusively MLL-driven but is especially linked to activation of HOXA genes in pediatric acute lymphoblastic leukemia. Haematologica 95(10):1675–1682
Rippe V, Dittberner L, Lorenz VN, Drieschner N, Nimzyk R, Sendt W, Junker K, Belge G, Bullerdiek J (2010) The two stem cell microRNA gene clusters C19MC and miR-371-3 are activated by specific chromosomal rearrangements in a subgroup of thyroid adenomas. PLoS One 5(3):e9485
Mraz M, Dolezalova D, Plevova K, Stano Kozubik K, Mayerova V, Cerna K, Musilova K, Tichy B, Pavlova S, Borsky M, Verner J, Doubek M, Brychtova Y, Trbusek M, Hampl A, Mayer J, Pospisilova S (2012) MicroRNA-650 expression is influenced by immunoglobulin gene rearrangement and affects the biology of chronic lymphocytic leukemia. Blood 119(9):2110–2113
Parker BC, Annala MJ, Cogdell DE, Granberg KJ, Sun Y, Ji P, Li X, Gumin J, Zheng H, Hu L, Yli-Harja O, Haapasalo H, Visakorpi T, Liu X, Liu CG, Sawaya R, Fuller GN, Chen K, Lang FF, Nykter M, Zhang W (2013) The tumorigenic FGFR3-TACC3 gene fusion escapes miR-99a regulation in glioblastoma. J Clin Invest 123(2):855–865. doi:10.1172/JCI67144
Hickey CJ, Schwind S, Radomska HS, Dorrance AM, Santhanam R, Mishra A, Wu YZ, Alachkar H, Maharry K, Nicolet D, Mrózek K, Walker A, Eiring AM, Whitman SP, Becker H, Perrotti D, Wu LC, Zhao X, Fehniger TA, Vij R, Byrd JC, Blum W, Lee LJ, Caligiuri MA, Bloomfield CD, Garzon R, Marcucci G (2013) Lenalidomide-mediated enhanced translation of C/EBPα-p30 protein up-regulates expression of the antileukemic microRNA-181a in acute myeloid leukemia. Blood 121(1):159–169
Kotani A, Ha D, Hsieh J, Rao PK, Schotte D, den Boer ML, Armstrong SA, Lodish HF (2009) MiR-128b is a potent glucocorticoid sensitizer in MLL-AF4 acute lymphocytic leukemia cells and exerts cooperative effects with miR-221. Blood 114(19):4169–4178
Diakos C, Zhong S, Xiao Y, Zhou M, Vasconcelos GM, Krapf G, Yeh RF, Zheng S, Kang M, Wiencke JK, Pombo-de-Oliveira MS, Panzer-Grümayer R, Wiemels JL (2010) TEL-AML1 regulation of survivin and apoptosis via miRNA-494 and miRNA-320a. Blood 116(23):4885–4893
Herrero MartÃn D, Boro A, Schäfer BW (2013) Cell-based small-molecule compound screen identifies fenretinide as potential therapeutic for translocation-positive rhabdomyosarcoma. PLoS One 8(1):e55072. doi:10.1371/journal.pone.0055072
Desjobert C, Renalier MH, Bergalet J, Dejean E, Joseph N, Kruczynski A, Soulier J, Espinos E, Meggetto F, Cavaillé J, Delsol G, Lamant L (2011) MiR-29a down-regulation in ALK-positive anaplastic large cell lymphomas contributes to apoptosis blockade through MCL-1 overexpression. Blood 117(24):6627–6637
Li Z, Huang H, Chen P, He M, Li Y, Arnovitz S, Jiang X, He C, Hyjek E, Zhang J, Zhang Z, Elkahloun A, Cao D, Shen C, Wunderlich M, Wang Y, Neilly MB, Jin J, Wei M, Lu J, Valk PJ, Delwel R, Lowenberg B, Le Beau MM, Vardiman J, Mulloy JC, Zeleznik-Le NJ, Liu PP, Zhang J, Chen J (2012) MiR-196b directly targets both HOXA9/MEIS1 oncogenes and FAS tumour suppressor in MLL-rearranged leukaemia. Nat Commun 3:688
Borjigin N, Ohno S, Wu W, Tanaka M, Suzuki R, Fujita K, Takanashi M, Oikawa K, Goto T, Motoi T, Kosaka T, Yamamoto K, Kuroda M (2012) TLS-CHOP represses miR-486 expression, inducing upregulation of a metastasis regulator PAI-1 in human myxoid liposarcoma. Biochem Biophys Res Commun 427(2):355–360
den Hollander MW, Gietema JA, de Jong S, Walenkamp AM, Reyners AK, Oldenhuis CN, de Vries EG (2013) Translating TRAIL-receptor targeting agents to the clinic. Cancer Lett 332(2):194–201
Thangaraju S, Subramani E, Chakravarty B, Chaudhury K (2012) Therapeutic targeting of the TNF superfamily: a promising treatment for advanced endometrial adenocarcinoma. Gynecol Oncol 127(2):426–432
Shirley S, Morizot A, Micheau O (2011) Regulating TRAIL receptor-induced cell death at the membrane : a deadly discussion. Recent Pat Anticancer Drug Discov 6(3):311–323
Voelkel-Johnson C (2011) TRAIL-mediated signaling in prostate, bladder and renal cancer. Nat Rev Urol 8(8):417–427
Wu GS, Burns TF, McDonald ER 3rd, Meng RD, Kao G, Muschel R, Yen T, el-Deiry WS (1999) Induction of the TRAIL receptor KILLER/DR5 in p53-dependent apoptosis but not growth arrest. Oncogene 18(47):6411–6418
Yang TY, Chang GC, Chen KC, Hung HW, Hsu KH, Wu CH, Sheu GT, Hsu SL (2013) Pemetrexed induces both intrinsic and extrinsic apoptosis through ataxia telangiectasia mutated/p53-dependent and -independent signaling pathways. Mol Carcinog 52(3):183–194
Liu Y, Gao F, Jiang H, Niu L, Bi Y, Young CY, Yuan H, Lou H (2013) Induction of DNA damage and ATF3 by retigeric acid B, a novel topoisomerase II inhibitor, promotes apoptosis in prostate cancer cells. Cancer Lett 337(1):66–76. doi:10.1016/j.canlet.2013.05.022
Stagni V, Mingardi M, Santini S, Giaccari D, Barilà D (2010) ATM kinase activity modulates cFLIP protein levels: potential interplay between DNA damage signalling and TRAIL-induced apoptosis. Carcinogenesis 31(11):1956–1963
Ivanov VN, Zhou H, Partridge MA, Hei TK (2009) Inhibition of ataxia telangiectasia mutated kinase activity enhances TRAIL-mediated apoptosis in human melanoma cells. Cancer Res 69(8):3510–3519
Solier S, Sordet O, Kohn KW, Pommier Y (2009) Death receptor-induced activation of the Chk2- and histone H2AX-associated DNA damage response pathways. Mol Cell Biol 29(1):68–82
Gotanda K, Hirota T, Matsumoto N, Ieiri I (2013) MicroRNA-433 negatively regulates the expression of thymidylate synthase (TYMS) responsible for 5-fluorouracil sensitivity in HeLa cells. BMC Cancer 13(1):369
Pouliot LM, Chen YC, Bai J, Guha R, Martin SE, Gottesman MM, Hall MD (2012) Cisplatin sensitivity mediated by WEE1 and CHK1 is mediated by miR-155 and the miR-15 family. Cancer Res 72(22):5945–5955
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2014 Springer International Publishing Switzerland
About this chapter
Cite this chapter
Farooqi, A.A. (2014). miRNA Regulation of DNA Damage Repair Proteins in Cancer Cells: Interplay of ATM, TRAIL and miRNA. In: Sarkar, F. (eds) MicroRNA Targeted Cancer Therapy. Springer, Cham. https://doi.org/10.1007/978-3-319-05134-5_16
Download citation
DOI: https://doi.org/10.1007/978-3-319-05134-5_16
Published:
Publisher Name: Springer, Cham
Print ISBN: 978-3-319-05133-8
Online ISBN: 978-3-319-05134-5
eBook Packages: Biomedical and Life SciencesBiomedical and Life Sciences (R0)