Overview
- Editors:
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Xiangyu Deng
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Center for Food Safety, University of Georgia, Griffin, USA
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Henk C. den Bakker
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Department of Animal and Food Sciences, Texas Tech University, Lubbock, USA
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Rene S. Hendriksen
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National Food Institute, Technical University of Denmark, Copenhagen, Denmark
- Comprehensive information for applying genomics to food safety
- Includes case studies
- Discusses latest bioinformatics tools
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Table of contents (10 chapters)
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- Peter Gerner-Smidt, Heather Carleton, Eija Trees
Pages 1-11
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- Peter R. Wielinga, Rene S. Hendriksen, Frank M. Aarestrup, Ole Lund, Saskia L. Smits, Marion P. G. Koopmans et al.
Pages 13-31
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- David Boxrud, William J. Wolfgang
Pages 33-50
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- Henk C. den Bakker, Laura K. Strawn, Xiangyu Deng
Pages 51-64
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- Mette Voldby Larsen, Katrine G. Joensen, Ea Zankari, Johanne Ahrenfeldt, Oksana Lukjancenko, Rolf Sommer Kaas et al.
Pages 65-90
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- John Wain, Justin O’Grady
Pages 91-107
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- Valeria Michelacci, Rosangela Tozzoli, Alfredo Caprioli, Stefano Morabito
Pages 109-126
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- Saskia L. Smits, Marion P. G. Koopmans
Pages 145-166
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- Joelle K. Salazar, Yun Wang, Wei Zhang
Pages 167-200
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Back Matter
Pages 201-205
About this book
This book provides a timely and thorough snapshot into the emerging and fast evolving area of applied genomics of foodborne pathogens. Driven by the drastic advance of whole genome shot gun sequencing (WGS) technologies, genomics applications are becoming increasingly valuable and even essential in studying, surveying and controlling foodborne microbial pathogens. The vast opportunities brought by this trend are often at odds with the lack of bioinformatics know-how among food safety and public health professionals, since such expertise is not part of a typical food microbiology curriculum and skill set. Further complicating the challenge is the large and ever evolving body of bioinformatics tools that can obfuscate newcomers to this area. Although reviews, tutorials and books are not in short supply in the fields of bioinformatics and genomics, until now there has not been a comprehensive and customized source of information designed for and accessible to microbiologists interested inapplying cutting-edge genomics in food safety and public health research. This book fills this void with a well-selected collection of topics, case studies, and bioinformatics tools contributed by experts at the forefront of foodborne pathogen genomics research.
Editors and Affiliations
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Center for Food Safety, University of Georgia, Griffin, USA
Xiangyu Deng
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Department of Animal and Food Sciences, Texas Tech University, Lubbock, USA
Henk C. den Bakker
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National Food Institute, Technical University of Denmark, Copenhagen, Denmark
Rene S. Hendriksen