Abstract
Gracilibacter thermotolerans, with strain JW/YJL-S1T as the type strain, is the only species of the genus Gracilibacter. The type strain, isolated from sediment of an acid sulfate-containing water of a constructed wetland system (Savannah River Site near Aiken, SC, USA), is obligatorily anaerobic, chemoorganotrophic, asporogenic, and thermotolerant. Its closest phylogenetic neighbor is Lutispora thermophila, with which it shares 85.3 % 16S rRNA gene sequence similarity. As these two genera form an individual clade among neighboring lineages with family status, Lutispora is transferred into the family Gracilibacteraceae on the basis of its phylogenetic position.
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References
Cappuccin JG, Sherman N (1987) Microbiology: a laboratory manual, 2nd edn. Benjamin & Cummins, Menlo Park
Collins MD, Lawson PA, Willems A, Cordoba JJ, Fernandez-Garayzabal J, Garcia P, Cai J, Hippe H, Farrow JAE (1994) The phylogeny of the genus Clostridium: proposal of five new genera and eleven new species combinations. Int J Syst Bacteriol 44:812–826
Lee YJ (2005) Microbial diversity in a constructed wetland system for treatment of acid sulfate water. PhD thesis, University of Georgia, Athens
Lee Y-J, Romanek CS, Mills GL, Davis RC, Whitman WB, Wiegel J (2006) Gracilibacter thermotolerans gen. nov., sp. nov., an anaerobic, thermotolerant bacterium from a constructed wetland receiving acid sulfate water. Int J Syst Evol Microbiol 56:2089–2093
Ljungdahl LG, Wiegel J (1986) Anaerobic fermentations. In: Demain AL, Solomon NA (eds) Manual of industrial microbiology and biotechnology. American Society for Microbiology, Washington, DC, pp 84–96
Sasaki K, Haruta S, Tatara M, Yamazawa A, Ueno Y, Ishii M, Igarashi Y (2006) Microbial community in a methanogenic packed-bed reactor successfully operating at short hydraulic retention time. J Biosci Bioeng 101:271–273
Sasaki K, Haruta S, Ueno Y, Ishii M, Igarashi Y (2007) Microbial populations in the biomass adhering to supporting material in a packed-bed reactor degrading organic solid waste. Appl Microbiol Biotechnol 75:941–952
Shiratori H, Ikeno H, Ayame S, Kataoka N, Miya A, Hosono K, Beppu T, Ueda K (2006) Isolation and characterization of a new Clostridium sp. that performs effective cellulosic waste digestion in a thermophilic methanogenic bioreactor. Appl Environ Microbiol 72:3702–3709
Shiratori H, Ohiwa H, Ikeno H, Ayame S, Kataoka N, Miya A, Beppu T, Ueda K (2008) Lutispora thermophila gen.nov, sp. nov., a thermophilic, spore-forming bacterium isolated from a thermophilic methanogenic bioreactor digesting municipal solid wastes. Int J Syst Evol Microbiol 58:964–969
Sizova MV, Izquierdo JA, Panikov NS, Lynd LR (2011) Cellulose and xylan-degrading thermophilic anaerobic bacteria from biocompost. Appl Environ Microbiol 77:2282–2291
Stamatakis A (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22:2688–2690
Tischer K, Kleinsteuber S, Schleinitz KM, Fetzer I, Spott O, Stange F, Lohse U, Franz J, Neumann F, Gerling S, Schmidt C, Hasselwander E, Harms H, Wendeberg A (2013) Microbial communities along biogeochemical gradients in a hydrocarbon-contaminated aquifer. Environ Microbiol 15:2603–2615
Widdel F, Bak F (1992) Gram-negative mesophilic sulfate-reducing bacteria. In: Balows A, Trüper HG, Dworkin M, Harder W, Schleifer KH (eds) The prokaryotes, vol 4, 2nd edn. Springer, New York
Wiegel J (1998) Anaerobic alkali-thermophiles, a novel group of extremophiles. Extremophiles 2:257–267
Yarza P, Ludwig W, Euzéby J, Amann R, Schleifer K-H, Glöckner FO, Rosselló-Móra R (2010) Update of the All-Species Living-Tree Project based on 16S and 23S rRNA sequence analyses. Syst Appl Microbiol 33:291–299
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Stackebrandt, E. (2014). The Family Gracilibacteraceae and Transfer of the Genus Lutispora into Gracilibacteraceae . In: Rosenberg, E., DeLong, E.F., Lory, S., Stackebrandt, E., Thompson, F. (eds) The Prokaryotes. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-30120-9_358
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DOI: https://doi.org/10.1007/978-3-642-30120-9_358
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