Abstract
Expectation-maximization algorithms, or em algorithms for short, are iterative algorithms designed to solve maximum likelihood estimation problems. The general setting is that one observes a random sample Y 1, Y 2, …, Y n of a random variable Y whose probability density function (pdf) \(f(\,\cdot \,\vert \,x_{o})\) with respect to some (known) dominating measure is known up to an unknown “parameter” x o . The goal is to estimate x o and, one might add, to do it well. In this chapter, that means to solve the maximum likelihood problem.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Aronszajn, N., Smith, K.T.: Theory of Bessel potentials. I. Ann. Inst. Fourier (Grenoble) 11, 385–475 (1961). www.numdam.org
Atkinson, K.E.: The numerical solution of integral equations on the half line. SIAM J. Numer. Anal. 6, 375–397 (1969)
Bardsley, J.M., Luttman, A.: Total variation-penalized Poisson likelihood estimation for ill-posed problems. Adv. Comput. Math. 31, 35–39 (2009)
Bertero, M., Bocacci, P., Desiderá, G., Vicidomini, G.: Image de-blurring with Poisson data: from cells to galaxies. Inverse Probl. 25(123006), 26 (2009)
Browne, J., De Pierro, A.R.: A row-action alternative to the EM algorithm for maximizing likelihoods in emission tomography. IEEE Trans. Med. Imaging 15, 687–699 (1996)
Brune, C., Sawatzky, A., Burger, M.: Bregman-EM-TV methods with application to optical nanoscopy. In: Second International Conference on Scale Space and Variational Methods in Computer Vision, Voss. Lecture Notes in Computer Science, vol. 5567, pp. 235–246. Springer, Berlin (2009)
Byrne, C.L.: Iterative image reconstruction algorithms based on cross-entropy minimization. IEEE Trans. Image Process. 2, 96–103 (1993)
Byrne, C.L.: Block-iterative methods for image reconstruction from projections. IEEE Trans. Image Process. 5, 792–794 (1996)
Byrne, C.L.: Accelerating the EMML algorithm and related iterative algorithms by rescaled block-iterative methods. IEEE Trans. Image Process. 7, 792–794 (1998)
Byrne, C.L.: Likelihood maximization for list-mode emission tomographic image reconstruction. IEEE Trans. Med. Imaging 20, 1084–1092 (2001)
Byrne, C.L.: Choosing parameters in block-iterative or ordered subset reconstruction algorithms. IEEE Trans. Image Process. 14, 321–327 (2005)
Byrne, C.L.: Signal Processing: A Mathematical Approach. AK Peters, Wellesley (2005)
Byrne, C.L.: Applied Iterative Methods. AK Peters, Wellesley (2008)
Byrne, C.L., Fiddy, M.A.: Images as power spectra; reconstruction as a Wiener filter approximation. Inverse Probl. 4, 399–409 (1988)
Cao, Y.u., Eggermont, P.P.B., Terebey, S.: Cross Burg entropy maximization and its application to ringing suppression in image reconstruction. IEEE Trans. Image Process. 8, 286–292 (1999)
Censor, Y., Eggermont, P.P.B., Gordon, D.: Strong under relaxation in Kaczmarz’s method for inconsistent systems. Numer. Math. 41, 83–92 (1983)
Censor, Y., Lent, A.H.: Optimization of “log x” entropy over linear equality constraints. SIAM J. Control. Optim. 25, 921–933 (1987)
Censor, Y., Segman, J.: On block-iterative entropy maximization. J. Inf. Optim. Sci. 8, 275–291 (1987)
Censor, Y., Zenios, S.A.: Proximal minimization algorithm with D-functions. J. Optim. Theory Appl. 73, 451–464 (1992)
Cover, T.M.: An algorithm for maximizing expected log investment return. IEEE Trans. Inf. Theory 30, 369–373 (1984)
Crowther, R.A., DeRosier, D.J., Klug, A.: The reconstruction of three-dimensional structure from projections and its application to electron microscopy. Proc. R. Soc. Lond. A Math. Phys. Sci. 317(3), 19–340 (1971)
Csiszár, I.: I-divergence geometry of probability distributions and minimization problems. Ann. Probab. 3, 146–158 (1975)
Csiszár, I., Tusnády, G.: Information geometry and alternating minimization procedures. Stat. Decis. 1(Supplement 1), 205–237 (1984)
Daley, D.J., Vere-Jones, D.: An Introduction to the Theory of Point Processes. Springer, New York (2003)
Darroch, J.N., Ratcliff, D.: Generalized iterative scaling for log-linear models. Ann. Math. Stat. 43, 1470–1480 (1972)
Daube-Witherspoon, M.E., Muehllehner, G.: An iterative space reconstruction algorithm suitable for volume ECT. IEEE Trans. Med. Imaging 5, 61–66 (1986)
Dempster, A.P., Laird, N.M., Rubin, D.B.: Maximum likelihood from incomplete data via the EM algorithm. J. R. Stat. Soc. B 37, 1–38 (1977)
De Pierro, A.R.: On the convergence of the iterative image space reconstruction algorithm for volume ECT. IEEE Trans. Med. Imaging 6, 174–175 (1987)
De Pierro, A.R.: A modified expectation maximization algorithm for penalized likelihood estimation in emission tomography. IEEE Trans. Med. Imaging 14, 132–137 (1995)
De Pierro, A., Yamaguchi, M.: Fast EM-like methods for maximum a posteriori estimates in emission tomography. Trans. Med. Imaging 20, 280–288 (2001)
Dey, N., Blanc-Ferraud, L., Zimmer, Ch., Roux, P., Kam, Z., Olivo-Martin, J.-Ch., Zerubia, J.: Richardson-Lucy algorithm with total variation regularization for 3D confocal microscope deconvolution. Microsc. Res. Tech. 69, 260–266 (2006)
Duijster, A., Scheunders, P., De Backer, S.: Wavelet-based EM algorithm for multispectral-image restoration. IEEE Trans. Geosci. Remote Sens. 47, 3892–3898 (2009)
Eggermont, P.P.B.: Multiplicative iterative algorithms for convex programming. Linear Algebra Appl. 130, 25–42 (1990)
Eggermont, P.P.B.: Nonlinear smoothing and the EM algorithm for positive integral equations of the first kind. Appl. Math. Optim. 39, 75–91 (1999)
Eggermont, P.P.B., Herman, G.T., Lent, A.H.: Iterative algorithms for large partitioned linear systems with applications to image reconstruction. Linear Algebra Appl. 40, 37–67 (1981)
Eggermont, P.P.B., LaRiccia, V.N.: Smoothed maximum likelihood density estimation for inverse problems. Ann. Stat. 23, 199–220 (1995)
Eggermont, P.P.B., LaRiccia, V.N.: Maximum penalized likelihood estimation and smoothed EM algorithms for positive integral equations of the first kind. Numer. Funct. Anal. Optim. 17, 737–754 (1997)
Eggermont, P.P.B., LaRiccia, V.N.: On EM-like algorithms for minimum distance estimation. Manuscript, University of Delaware (1998)
Eggermont, P.P.B., LaRiccia, V.N.: Maximum Penalized Likelihood Estimation, I: Density Estimation. Springer, New York (2001)
Elfving, T.: On some methods for entropy maximization and matrix scaling. Linear Algebra Appl. 34, 321–339 (1980)
Fessler, J.A., Ficaro, E.P., Clinthorne, N.H., Lange, K.: Grouped coordinate ascent algorithms for penalized log-likelihood transmission image reconstruction. IEEE Trans. Med. Imaging 16, 166–175 (1997)
Fessler, J.A., Hero, A.O.: Penalized maximum-likelihood image reconstruction using space-alternating generalized EM algorithms. IEEE Trans. Image Process. 4, 1417–1429 (1995)
Figueiredo, M.A.T., Nowak, R.D.: An EM algorithm for wavelet-based image restoration. IEEE Trans. Image Process. 12, 906–916 (2003)
Frank, J.: Three-Dimensional Electron Microscopy of Macromolecular Assemblies, 2nd edn. Oxford University Press, New York (2006)
Geman, S., Geman, D.: Stochastic relaxation, Gibbs distributions and the Bayesian restoration of images. IEEE Trans. Pattern Anal. Mach. Intell. 6, 721–741 (1984)
Geman, S., McClure, D.E.: Bayesian image analysis, an application to single photon emission tomography. In: Proceedings of the Statistical Computing Section, Las Vegas, pp. 12–18. American Statistical Association (1985)
Good, I.J.: A nonparametric roughness penalty for probability densities. Nature 229, 29–30 (1971)
Gordon, R., Bender, R., Herman, G.T.: Algebraic reconstruction techniques (ART) for three-dimensional electron microscopy and X-ray photography. J. Theor. Biol. 29, 471–482 (1970)
Green, P.J.: Bayesian reconstructions from emission tomography data using a modified EM algorithm. IEEE Trans. Med. Imaging 9, 84–93 (1990)
Guillaume, M., Melon, P., Réfrégier, P.: Maximum-likelihood estimation of an astronomical image from a sequence at low photon levels. J. Opt. Soc. Am. A 15, 2841–2848 (1998)
Haltmeier, M., Leitão, A., Resmerita, E.: On regularization methods of EM-Kaczmarz type. Inverse Probl. 25(075008), 17 (2009)
Hanke, M.: Accelerated Landweber iterations for the solution of ill-posed problems. Numer. Math. 60, 341–373 (1991)
Hartley, H.O.: Maximum likelihood estimation from incomplete data. Biometrics 14, 174–194 (1958)
Hebert, T., Leahy, R.: A generalized EM algorithm for 3-D Bayesian reconstruction from Poisson data using Gibbs priors. IEEE Trans. Med. Imaging 8, 194–202 (1989)
Herman, G.T.: Fundamentals of Computerized Tomography: Image Reconstruction from Projections. Springer, New York (2009)
Herman, G.T., Meyer, L.B.: Algebraic reconstruction techniques can be made computationally efficient. IEEE Trans. Med. Imaging 12, 600–609 (1993)
Holte, S., Schmidlin, P., Lindén, A., Rosenqvist, G., Eriksson, L.: Iterative image reconstruction for positron emission tomography: a study of convergence and quantitation problems. IEEE Trans. Nucl. Sci. 37, 629–635 (1990)
Horváth, I., Bagoly, Z., Balász, L.G., de Ugarte Postigo, A., Veres, P., Mészáros, A.: Detailed classification of Swift’s Gamma-ray bursts. J. Astrophys. 713, 552–557 (2010)
Hudson, H.M., Larkin, R.S.: Accelerated image reconstruction using ordered subsets of projection data. IEEE Trans. Med. Imaging 13, 601–609 (1994)
Kamphuis, C., Beekman, F.J., Viergever, M.A.: Evaluation of OS-EM vs. EM-ML for 1D, 2D and fully 3D SPECT reconstruction. IEEE Trans. Nucl. Sci. 43, 2018–2024 (1996)
Kondor, A.: Method of convergent weights – an iterative procedure for solving Fredholm’s integral equations of the first kind. Nucl. Instrum. Methods 216, 177–181 (1983)
Lange, K.: Convergence of EM image reconstruction algorithms with Gibbs smoothing. IEEE Trans. Med. Imaging 9, 439–446 (1990)
Lange, K., Bahn, M., Little, R.: A theoretical study of some maximum likelihood algorithms for emission and transmission tomography. IEEE Trans. Med. Imaging 6, 106–114 (1987)
Lange, K., Carson, R.: EM reconstruction algorithms for emission and transmission tomography. J. Comput. Assist. Tomogr. 8, 306–316 (1984)
Latham, G.A.: Existence of EMS solutions and a priori estimates. SIAM J. Matrix Anal. Appl. 16, 943–953 (1995)
Levitan, E., Chan, M., Herman, G.T.: Image-modeling Gibbs priors. Graph. Models Image Process. 57, 117–130 (1995)
Lewitt, R.M., Muehllehner, G.: Accelerated iterative reconstruction in PET and TOFPET. IEEE Trans. Med. Imaging 5, 16–22 (1986)
Liu, C., Rubin, H.: The ECME algorithm: a simple extension of EM and ECM with faster monotone convergence. Biometrika 81, 633–648 (1994)
Llacer, J., Veklerov, E.: Feasible images and practical stopping rules for iterative algorithms in emission tomography. IEEE Trans. Med. Imaging 8, 186–193 (1989)
Lucy, L.B.: An iterative technique for the rectification of observed distributions. Astron. J. 79, 745–754 (1974)
McLachlan, G.J., Krishnan, T.: The EM Algorithm and Its Extensions. Wiley, Hoboken (2008)
Meidunas, E.: Re-scaled block iterative expectation maximization maximum likelihood (RBI-EMML) abundance estimation and sub-pixel material identification in hyperspectral imagery. MS thesis, Department of Electrical Engineering, University of Massachusetts Lowell (2001)
Miller, M.I., Roysam, B.: Bayesian image reconstruction for emission tomography incorporating Good’s roughness prior on massively parallel processors. Proc. Natl. Acad. Sci. U.S.A. 88, 3223–3227 (1991)
Mülthei, H.N., Schorr, B.: On an iterative method for a class of integral equations of the first kind. Math. Methods Appl. Sci. 9, 137–168 (1987)
Mülthei, H.N., Schorr, B.: On properties of the iterative maximum likelihood reconstruction method. Math. Methods Appl. Sci. 11, 331–342 (1989)
Nielsen, S.F.: The stochastic EM algorithm: estimation and asymptotic results. Bernoulli 6, 457–489 (2006)
Parra, L., Barrett, H.: List-mode likelihood: EM algorithm and image quality estimation demonstrated on 2-D PET. IEEE Trans. Med. Imaging 17, 228–235 (1998)
Penczek, P., Zhu, J., Schroeder, R., Frank, J.: Three-dimensional reconstruction with contrast transfer function compensation. Scanning Microsc. 11, 147–154 (1997)
Redner, R.A., Walker, H.F.: Mixture densities, maximum likelihood and the EM algorithm. SIAM Rev. 26, 195–239 (1984)
Resmerita, E., Engl, H.W., Iusem, A.N.: The expectation-maximization algorithm for ill-posed integral equations: a convergence analysis. Inverse Probl. 23, 2575–2588 (2007)
Richardson, W.H.: Bayesian based iterative method of image restoration. J. Opt. Soc. Am. 62, 55–59 (1972)
Rockmore, A., Macovski, A.: A maximum likelihood approach to emission image reconstruction from projections. IEEE Trans. Nucl. Sci. 23, 1428–1432 (1976)
Scheres, S.H.W., Gao, H.X., Valle, M., Herman, G.T., Eggermont, P.P.B., Frank, J., Carazo, J.-M.: Disentangling conformational states of macromolecules in 3D-EM through likelihood optimization. Nat. Methods 4, 27–29 (2007)
Scheres, S.H.W., Núñez-Ramírez, R., Gómez-Llorente, Y., San Martín, C., Eggermont, P.P.B., Carazo, J.-M.: Modeling experimental image formation for likelihood-based classification of electron microscopy. Structure 15, 1167–1177 (2007)
Scheres, S.H.W., Valle, M., Núñez, R., Sorzano, C.O.S., Marabini, R., Herman, G.T., Carazo, J.-M.: Maximum-likelihood multi-reference refinement for electron microscopy images. J. Mol. Biol. 348, 139–149 (2005)
Schmidlin, P.: Iterative separation of tomographic scintigrams. Nuklearmedizin 11, 1–16 (1972)
Setzer, S., Steidl, G., Teuber, T.: Deblurring Poissonian images by split Bregman techniques. J. Vis. Commun. Image Represent. 21, 193–199 (2010)
Shepp, L.A., Vardi, Y.: Maximum likelihood reconstruction in emission tomography. IEEE Trans. Med. Imaging 1, 113–122 (1982)
Sigworth, F.J.: A maximum-likelihood approach to single-particle image refinement. J. Struct. Biol. 122, 328–339 (1998)
Silverman, B.W., Jones, M.C., Wilson, J.D., Nychka, D.W.: A smoothed EM algorithm approach to indirect estimation problems, with particular reference to stereology and emission tomography (with discussion). J. R. Stat. Soc. B 52, 271–324 (1990)
Sun, Y., Walker, J.G.: Maximum likelihood data inversion for photon correlation spectroscopy. Meas. Sci. Technol. 19(115302), 8 (2008)
Tanaka, E., Kudo, H.: Optimal relaxation parameters of DRAMA (dynamic RAMLA) aiming at one-pass image reconstruction for 3D-PET. Phys. Med. Biol. 55, 2917–2939 (2010)
Tarasko, M.Z.: On a method for solution of the linear system with stochastic matrices (in Russian), Report Physics and Energetics Institute, Obninsk PEI-156 (1969)
Trummer, M.R.: A note on the ART of relaxation. Computing 33, 349–352 (1984)
van der Sluis, A., van der Vorst, H.A.: SIRT- and CG-type methods for the iterative solution of sparse linear least-squares problems. Linear algebra in image reconstruction from projections. Linear Algebra Appl. 130, 257–303 (1990)
Vardi, Y., Shepp, L.A., Kaufman, L.: A statistical model for positron emission tomography (with discussion). J. Am. Stat. Assoc. 80, 8–38 (1985)
Wernick, M., Aarsvold, J.: Emission Tomography: The Fundamentals of PET and SPECT. Elsevier Academic, San Diego (2004)
Wu, C.F.J.: On the convergence properties of the EM algorithm. Ann. Stat. 11, 95–103 (1983)
Yu, S., Latham, G.A., Anderssen, R.S.: Stabilizing properties of maximum penalized likelihood estimation for additive Poisson regression. Inverse Probl. 10, 1199–1209 (1994)
Yuan, J., Yu, J.: Median-prior tomography reconstruction combined with nonlinear anisotropic diffusion filtering. J. Opt. Soc. Am. A 24, 1026–1033 (2007)
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2015 Springer Science+Business Media New York
About this entry
Cite this entry
Byrne, C., Eggermont, P.P.B. (2015). EM Algorithms. In: Scherzer, O. (eds) Handbook of Mathematical Methods in Imaging. Springer, New York, NY. https://doi.org/10.1007/978-1-4939-0790-8_8
Download citation
DOI: https://doi.org/10.1007/978-1-4939-0790-8_8
Publisher Name: Springer, New York, NY
Print ISBN: 978-1-4939-0789-2
Online ISBN: 978-1-4939-0790-8
eBook Packages: Mathematics and StatisticsReference Module Computer Science and Engineering