Skip to main content

Clinical Ontologies

  • Reference work entry
  • First Online:
Encyclopedia of Database Systems
  • 22 Accesses

Synonyms

Clinical classifications; Clinical nomenclatures; Clinical terminologies

Definition

An ontology is a formal representation of a set of heterogeneous concepts. However, in the life sciences, the term clinical ontology has also been more broadly defined as also comprising all forms of classified terminologies, including classifications and nomenclatures. Clinical ontologies provide not only a controlled vocabulary but also relationships among concepts allowing computer reasoning such that different parties, like physicians and insurers, can efficiently answer complex queries.

Historical Background

As the life sciences integrates increasingly sophisticated systems of patient management, different means of data representation have had to keep pace to support user systems. Simultaneously, the explosion of genetic information from breakthroughs from the Human Genome Project and gene chip technology have further expedited the need for robust, scalable platforms for handling...

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 4,499.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Hardcover Book
USD 6,499.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Recommended Reading

  1. American Medical Association. Cited; Available at: http://www.cptnetwork.com

  2. American Psychiatric Association. Cited; Available at: http://www.psych.org/MainMenu/Research/DSMIV.aspx

  3. Cimino JJ. Desiderata for controlled medical vocabularies in the twenty-first century. Methods Inf Med. 1998;37(4–5):394–403.

    Google Scholar 

  4. Cimino JJ. In defense of the Desiderata. [comment]. J Biomed Inform. 2006;39(3):299–306.

    Article  Google Scholar 

  5. Gruber TR. Toward principles for the design of ontologies used for knowledge sharing. Int J Hum Comput Stud. 1995;43(4–5):907–28.

    Article  Google Scholar 

  6. I.H.T.S.D. Cited; Available from: http://www.ihtsdo.org/our-standards/snomed-ct

  7. Khan AN et al. Standardizing laboratory data by mapping to LOINC. J Am Med Inform Assoc. 2006;13(3):353–5.

    Article  MathSciNet  Google Scholar 

  8. Mahner M, Kary M. What exactly are genomes, genotypes and phenotypes? and what about phenomes? J Theor Biol. 1997;186(1):55–63.

    Article  Google Scholar 

  9. Musen MA et al. PROTEGE-II: computer support for development of intelligent systems from libraries of components. Medinfo. 1995;8(Pt 1):766–70.

    Google Scholar 

  10. Nelson SJ, Johnston D, Humphreys BL. Relationships in medicical subject headings. In: Carol AB, Rebecca G, editors. Relationships in the organization of knowledge. Dordecht: Kluwer; 2001. p. 171–84.

    Chapter  Google Scholar 

  11. World Health Organization. Cited; Available at: http://www.who.int/classifications/icd/en/

  12. World Organization of National Colleges, Academies, and Academic Associations of General Practitioners/Family Physicians, ICPC. International classification of primary care. Oxford: Oxford University Press; 1987.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Yves A. Lussier .

Editor information

Editors and Affiliations

Section Editor information

Rights and permissions

Reprints and permissions

Copyright information

© 2018 Springer Science+Business Media, LLC, part of Springer Nature

About this entry

Check for updates. Verify currency and authenticity via CrossMark

Cite this entry

Lussier, Y.A., Chen, J.L. (2018). Clinical Ontologies. In: Liu, L., Özsu, M.T. (eds) Encyclopedia of Database Systems. Springer, New York, NY. https://doi.org/10.1007/978-1-4614-8265-9_62

Download citation

Publish with us

Policies and ethics