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Isotopes and Geobiology

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Encyclopedia of Geobiology

Part of the book series: Encyclopedia of Earth Sciences Series ((EESS))

Definition

It has long been recognized (e.g., Thode et al. (1949), Craig (1953) and Wellman et al. (1968)) that biological processes significantly fractionate the isotopes of C, N, and S, leading to characteristic biosignatures in sedimentary rocks that will be more or less preserved in the geological record. In the following, a brief overview is given of the major isotope fractionation processes in the biosphere and the geosphere. Special attention will be paid to secondary bacterial activity after deposition of the organic matter. Questions of general interest are isotopic indicators of early life on Earth and on Mars. A note of caution, however, is given whether abiogenic processes may lead to isotope compositions similar to that of biological activity.

Carbon isotope fractionation during photosynthesis

Early reviews by O’Leary (1981) and Farquhar et al. (1989) have provided the biochemical background of carbon isotope fractionations during photosynthesis, with more recent accounts...

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Bibliography

  • Abelson, P. H., and Hoering, T. C., 1961. Carbon isotope fractionation in formation of amino acids by photosynthetic organisms. Proceedings of the National Academy of Sciences of the United States of America, 47, 623.

    Article  Google Scholar 

  • Balci, N., Bullen, T. D., Witte-Lien, K., Shanks, W. C., Motelica, M., and Mandernack, K. W., 2006. Iron isotope fractionation during microbially substituted simulated Fe(II) oxidation and Fe(III) precipitation. Geochimica et Cosmochimica Acta, 70, 622–639.

    Article  Google Scholar 

  • Bolhar, R., Kamber, B. S., Moorbath, S., Fedo, C. M., and Whitehouse, M. J., 2004. Characterisation of early Archaean chemical sediments by trace element signatures. Earth and Planetary Science Letters, 222, 43–60.

    Article  Google Scholar 

  • Brunner, B., Bernasconi, S. M., Kleikemper, J., and Schroth, M. H., 2005. A model of oxygen and sulphur isotope fractionation in sulfate during bacterial sulfate reduction. Geochimica et Cosmochimica Acta, 69, 4773–4785.

    Article  Google Scholar 

  • Cameron, E. M., 1982. Sulphate and sulphate reduction in early Precambrian oceans. Nature, 296, 145–149.

    Article  Google Scholar 

  • Craig, H., 1953. The geochemistry of the stable carbon isotopes. Geochimica et Cosmochimica Acta, 3, 133–149.

    Article  Google Scholar 

  • Craig, H., 1954. Geochemical implications of the isotopic composition of carbon in ancient rocks. Geochimica et Cosmochimica Acta, 6, 186–196.

    Article  Google Scholar 

  • Croal, L. R., Johnson, C. M., Beard, B. L., and Newman, D. K., 2004. Iron isotope fractionation by Fe(II) oxidizing photoautotrophic bacteria. Geochimica et Cosmochimica Acta, 68, 1227–1242.

    Article  Google Scholar 

  • Farquhar, G. D., Ehleringer, J. R., and Hubick, K. T., 1989. Carbon isotope discrimination and photosynthesis. Annual Review of Plant Physiology and Plant Molecular Biology, 40, 503–537.

    Article  Google Scholar 

  • Farquhar, J., Thiemens, M. H., and Jackson, T., 1998, Atmosphere-surface interactions on Mars: Δ17O measurements of carbonate from ALH 84001. Science, 280, 1580–1582.

    Article  Google Scholar 

  • Farquhar, J., Bao, H., and Thiemens, M., 2000. Atmospheric influence of Earth’s earliest sulfur cycle. Science, 289, 756–759.

    Article  Google Scholar 

  • Farquhar, J., Johnston, D. T., Wing, B. A., Habicht, K. S., Canfield, D. E., Airieau, S., and Thiemens, M. H., 2003. Multiple sulphur isotope interpretations for biosynthetic pathways: implications for biological signatures in the sulphur isotope record. Geobiology, 1, 27–36.

    Article  Google Scholar 

  • Fogel, M. L., and Cifuentes, L. A., 1993. Isotope fractionation during primary production. In Engel, M. H., and Macko, S. A. (eds.), Organic Geochemistry. New York: Plenum, pp. 73–98.

    Chapter  Google Scholar 

  • Freeman, K. H., 2001. Isotopic biogeochemistry of marine organic carbon. Reviews in Mineralogy and Geochemistry, 43, 579–605.

    Article  Google Scholar 

  • Freeman, K. H., Hayes, J. M., Trendel, J. M., and Albrecht, P., 1990. Evidence from carbon isotope measurements for diverse origins of sedimentary hydrocarbons. Nature, 343, 254–256.

    Article  Google Scholar 

  • Goldhaber, M. B., and Kaplan, I. R., 1974. The sedimentary sulphur cycle. In Goldberg, E. B. (ed.), The Sea Vol IV. New York: Wiley.

    Google Scholar 

  • Harrison, A. G., and Thode, H. G., 1957a. Kinetic isotope effect in chemical reduction of sulphate. Faraday Society Transaction, 53, 1648–1651.

    Article  Google Scholar 

  • Harrison, A. G., and Thode, H. G., 1957b. Mechanism of the bacterial reduction of sulphate from isotope fractionation studies. Faraday Society Transaction, 54, 84–92.

    Article  Google Scholar 

  • Hayes, J. M., 1993. Factors controlling 13C contents of sedimentary organic compounds: principle and evidence. Marine Geology, 113, 111–125.

    Article  Google Scholar 

  • Hayes, J. M., 2001. Fractionation of carbon and hydrogen isotopes in biosynthetic processes. In Valley, J. W., and Cole, D. R. (eds.), Stable Isotope Geochemistry. Reviews in Mineralogy and Geochemistry, 43, 225–277.

    Google Scholar 

  • Johnson, C. M., Skulan, J. L., Beard, B. L., Sun, H., Nealson, K. H., and Braterman, P. S., 2002. Isotopic fraction between Fe(III) and Fe(II) in aqueous solutions. Earth and Planetary Science Letters, 195, 141–153.

    Article  Google Scholar 

  • Johnson, C. M., Roden, E. R., Welch, S. A., and Beard, B. L., 2005. Experimental constraints on Fe isotope fractionation during magnetite and Fe carbonate formation coupled to dissimilatory hydrous ferric oxide reduction. Geochimica et Cosmochimica Acta, 69, 963–993.

    Article  Google Scholar 

  • Johnston, D. T., Farquhar, J., Wing, B. A., Kaufman, A. J., Canfield, D. E., and Habicht, K. S., 2005. Multiple sulphur isotope fractionations in biological systems: a case study with sulphate reducers and sulphur disproportionators. American Journal of Science, 305, 645–660.

    Article  Google Scholar 

  • Jǿrgensen, B. B., Böttcher, M. A., Lüschen, H., Neretin, L. N., and Volkov, I. I., 2004. Anaerobic methane oxidation and a deep H2S sink generate isotopically heavy sulfides in Black Sea sediments. Geochimica et Cosmochimica Acta, 68, 2095–2118.

    Article  Google Scholar 

  • McKay, D. S., Gibson, E. K. Jr., Thomas-Keprta, K. L., Vali, H., Romanek, C. S., Clemett, S. J., Chillier, X. D. F., Maechling, C. R., and Zare, R. N.,  1996. Search for past life on Mars: possible relic biogenic activity in martian meteorite ALH 84001. Science, 273, 924–930.

    Article  Google Scholar 

  • McKibben, M. A., and Eldridge, C. S., 1995. Microscopic sulfur isotope variations in ore minerals from the Viburnum Trend, Southeast Missouri: a shrimp study. Economic Geology, 90, 228–245.

    Article  Google Scholar 

  • McKibben, M. A., and Riciputi, L. R., 1998. Sulfur isotopes by ion microprobe. In: Application of microanalytical techniques to understanding mineralizing processes. Reviews Economic Geology, 7, 121–140.

    Google Scholar 

  • Mojzsis, S. J., Arrhenius, G., McKeegan, K. D., Harrison, T. M., Nutman, A. P., and Friend, C. R. L., 1996. Evidence for life on Earth before 3,800 million years ago. Nature, 384, 55–59.

    Article  Google Scholar 

  • Monster, J., Appel, P. W., Thode, H. G., Schidlowski, M., Carmichael, C. W., and Bridgwater, D., 1979. Sulphur isotope studies in early Archean sediments from Isua, West Greenland: implications for the antiquity of bacterial sulfate reduction. Geochimica et Cosmochimica Acta, 43, 405–413.

    Article  Google Scholar 

  • Niles, P. B., Leshin, L. A., and Guan, Y., 2005. Microscale carbon isotope variability in ALH84001 carbonates and a discussion of possible formation environments. Geochimica et Cosmochimica Acta, 69, 2931–2944.

    Article  Google Scholar 

  • O’ Leary, M. H., 1981. Carbon isotope fractionation in plants. Phytochemistry, 20, 553–567.

    Article  Google Scholar 

  • Ono, S., Wing, B. A., Johnston, D., Farquhar, J., and Rumble, D., 2006. Mass-dependent fractionation of quadruple sulphur isotope system as a new tracer of sulphur biogeochemical cycles. Geochimica et Cosmochimica Acta, 70, 2238–2252.

    Article  Google Scholar 

  • Park, R., and Epstein, S., 1960. Carbon isotope fractionation during photosynthesis. Geochimica et Cosmochimica Acta, 21, 110–126.

    Article  Google Scholar 

  • Peckmann, J., and Thiel, V., 2004. Carbon cycling at ancient methane-seeps. Chemical Geology, 205, 443–467.

    Article  Google Scholar 

  • Rankama, K., 1954. Early pre-Cambrian carbon of biogenic origin from the Canadian Shield. Science, 119, 506.

    Article  Google Scholar 

  • Shen, Y., and Buick, R., 2004. The antiquity of microbial sulfate reduction. Earth Science Reviews, 64, 243–272.

    Article  Google Scholar 

  • Shen, Y., Buick, R., and Canfield, D. E., 2001. Isotopic evidence for microbial sulphate reduction in the early Archaean era. Nature, 410, 77–81.

    Article  Google Scholar 

  • Skulan, J. L., Beard, B. L., and Johnson, C. M., 2002. Kinetic and equilibrium Fe isotope fractionation between aqueous Fe(III) and hematite. Geochimica et Cosmochimica Acta, 66, 2995–3015.

    Article  Google Scholar 

  • Taran, Y. A., Kliger, G. A., and Sevastianov, V. S., 2007. Carbon isotope effect in the open system Fischer Trosch synthesis. Geochimica et Cosmochimica Acta, 71, 4474–4487.

    Article  Google Scholar 

  • Thode, H. G., Macnamara, J., and Collins, C. B., 1949. Natural variations in the isotopic content of sulphur and their significance. Canadian Journal of Research, 27B, 361.

    Article  Google Scholar 

  • Wellman, R. P., Cook, F. D., and Krouse, H. D., 1968. Nitrogen-15: microbiological alteration of abundance. Science, 161, 269–270.

    Article  Google Scholar 

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Hoefs, J. (2011). Isotopes and Geobiology. In: Reitner, J., Thiel, V. (eds) Encyclopedia of Geobiology. Encyclopedia of Earth Sciences Series. Springer, Dordrecht. https://doi.org/10.1007/978-1-4020-9212-1_120

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