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Scale-Up of Natural Product Isolation

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Natural Products Isolation

Part of the book series: Methods in Biotechnology ((MIBT,volume 20))

Summary

Scale-up of natural product isolation involves not only an increase in the scale of the purification of the target compound but also an improved level or scale in its production. As the scale increases, efficiency of operation becomes more important, necessitating process development. The nature of the scale-up challenge inevitably changes throughout the development cycle of a particular compound. This, together with the resources available, ultimately influences the strategy adopted. Factors important in successful scale-up are discussed with particular reference to microbial products and illustrated in case studies of the scale-up isolations of xenovulene A from Acremonium strictum, and (6S)-4,6-dimethyldodeca-2E,4E-dienoyl phomalactone from a Phomopsis sp.

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References

  1. Verrall, M. S. and Warr, S. R. C. (1998) Scale-up of natural products isolation, in Methods in Biotechnology, vol. 4: Natural Products Isolation (Cannell, R. J. P., ed.), Humana, Totowa, NJ.

    Google Scholar 

  2. Katzer, W., Blackburn, M., Charman, K., Martin, S., Penn, J., and Wrigley, S. (2001) Scale-up of filamentous organisms from tubes and shake-flasks into stirred vessels. Biochem. Eng. J. 7, 127–134.

    Article  CAS  Google Scholar 

  3. Ignova, M., Montague, G. A., Ward, A. C., and Glassey, J. (1999) Fermentation seed quality analysis with self-organising neural networks. Biotechnol. Bioeng. 64, 82–91.

    Article  CAS  Google Scholar 

  4. Cunha, C. C., Glassey, J., Montague, G. A., Albert, S., and Mohan, P. (2002) An assessment of seed quality and its influence on productivity estimation in an industrial antibiotic fermentation. Biotechnol. Bioeng. 78, 658–669.

    Article  CAS  Google Scholar 

  5. Neves, A. A., Vieira, L. M., and Menezes, J. C. (2001) Effects of preculture variability on clavulanic acid fermentation. Biotechnol. Bioeng. 72, 628–633.

    Article  CAS  Google Scholar 

  6. Vinci, V. A. and Byng, G. (1999) Strain improvement by nonrecombinant methods, in Manual of Industrial Microbiology and Biotechnology, 2 ed. (Demain, A. L. and Davies, J. E., eds.), ASM, Washington, DC, pp. 103–113.

    Google Scholar 

  7. Baltz, R. H. (1997). Molecular approaches to yield improvements, in Biotechnology of Antibiotics, 2 ed. (Strohl, W. R., ed.), Marcel Dekker, New York, pp. 49–62.

    Google Scholar 

  8. Baltz, R. H. (2001) Genetic methods and strategies for secondary metabolite yield improvements in actinomycetes. Antonie van Leeuwenhook 79, 251–259.

    Article  CAS  Google Scholar 

  9. Baltz, R. H. (2003) Genetic engineering solutions for natural products in actinomycetes, in Handbook of Industrial Cell Culture: Mammalian, Microbial, and Plant Cells (Vinci, V. A. and Parekh, S. R., eds.), Humana, Totawa, NJ, pp. 137–170.

    Google Scholar 

  10. Rodriguez, E., Hu, Z., Ou, S., Volchegursky, Y., Hutchinson, C. R., and McDaniel, R. (2003) Rapid engineering of polyketide overproduction by gene transfer to industrially optimised strains. J. Ind. Microbiol Biotechnol. 30, 480–488.

    Article  CAS  Google Scholar 

  11. Hu, Z., Hopwood, D. A., and Hutchinson, C. R. (2003) Enhanced hetero-logous polyketide production in Streptomyces by exploiting plasmid co-integration. J. Ind. Microbiol. Biotechnol. 30, 516–522.

    Article  CAS  Google Scholar 

  12. Regentin, R., Cadapan, L., Ou, S., Zavala, S., and Licari, P. (2002) Production of a novel FK520 analog in Streptomyces hygroscopicus: improving titer while minimizing impurities. J. Ind. Microbiol. Biotechnol. 28, 12–16.

    CAS  Google Scholar 

  13. Regentin, R., Kennedy, J., Wu, N., Carney, J. R., Licari, P., and Desai, R. (2004) Precursor-directed biosynthesis of novel triketide lactones. Biotechnol. Prog. 1, 122–127.

    Google Scholar 

  14. Verall, M. S. (ed) (1996) Downstream Processing of Natural Products—A Practical Handbook. Wiley, Chichester, UK.

    Google Scholar 

  15. Gailliot, F. P., Gleason, C., Wilson, J. A., and Zwarich, J. (1990) Fluidised bed adsorption for whole broth extraction. Biotechnol. Bioeng. 44, 922–929.

    Google Scholar 

  16. Schwartz, R. E., Sesin, D. F., Joshua, H. et al. (1992) Pneumocandins from Zalerion arboricola: I. Discovery and Isolation. J. Antibiot. 45, 1853–1866.

    CAS  Google Scholar 

  17. Lawton, L. A., McElhiney, J., and Edwards, C. (1999) Purification of closely eluting hydrophobic microcystins (peptide cyanotoxins) by normal-phase and reversed-phase flash chromatography. J. Chromatogr. A 848, 515–522.

    Article  CAS  Google Scholar 

  18. Jarvis, A. P., Morgan, E. D., and Edwards, C. (1999) Rapid separation of triterpenoids from Neem seed extracts. Phytochem. Anal. 10, 39–43.

    Article  CAS  Google Scholar 

  19. Arslanian, R. L., Parker, C. D., Wang, P. K. et al. (2002) Large-scale isolation and crystallization of epothilone D from Myxococcus xanthus cultures. J. Nat. Prod. 65, 570–572.

    Article  CAS  Google Scholar 

  20. Verpoorte, R. (1998) Exploration of nature’s chemodiversity: the role of secondary metabolites as leads in drug development. Drug Discovery Today 3, 232–238.

    Article  CAS  Google Scholar 

  21. Cordell, G. A. (1995) Changing strategies in natural products chemistry. Phytochemistry 40, 1585–1612.

    Article  CAS  Google Scholar 

  22. Faulkner, D. J. (2000) Marine pharmacology. Antonie van Leeuwenhook 77, 135–145.

    Article  CAS  Google Scholar 

  23. Mendola, D. (2003) Aquaculture of three phyla of marine invertebrates to yield bioactive metabolites: process developments and economics. Biomol. Eng. 20, 441–458.

    Article  CAS  Google Scholar 

  24. Schauffelberger, D. E., Koleck, M. P., Beutler, J. A. et al. (1991) The large-scale isolation of bryostatin 1 from Bugula neritina following current good manufacturing practices. J. Nat. Prod. 54, 1265–1270.

    Article  Google Scholar 

  25. Salomon, C. E., Magarvey, N. A., and Sherman, D. H. (2003) Merging the potential of microbial genetics with biological and chemical diversity: an even brighter future for marine natural product drug discovery. Nat. Prod. Rep. 21, 105–121.

    Article  Google Scholar 

  26. Ainsworth, A. M., Chicarelli-Robinson, M. I., Copp, B. R. et al. (1995) Xenovulene A, a novel GABA-benzodiazepine receptor binding compound produced by Acremonium strictum. J. Antibiot. 48, 568–573.

    CAS  Google Scholar 

  27. Blackburn, M., Fauth, U., Katzer, W., Renno, D., and Trew, S. (1996) Optimization of fermentation conditions for the production of a novel GABA-benzodiazepine receptor agonist by Acremonium strictum. J. Indust. Microbiol. 17, 36–40.

    Article  CAS  Google Scholar 

  28. Wrigley, S. K., Sadeghi, R., Bahl, S. et al. (1999) A novel (6S)-4,6-dimethyl-dodeca-2E,4E-dienoyl ester of phomalactone and related a-pyrone esters from a Phomopsis sp. with cytokine production inhibitory activity. J. Antibiot. 52, 862–872.

    CAS  Google Scholar 

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© 2006 Humana Press Inc., Totowa,NJ

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Martin, S.M., Kau, D.A., Wrigley, S.K. (2006). Scale-Up of Natural Product Isolation. In: Sarker, S.D., Latif, Z., Gray, A.I. (eds) Natural Products Isolation. Methods in Biotechnology, vol 20. Humana Press. https://doi.org/10.1385/1-59259-955-9:439

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  • DOI: https://doi.org/10.1385/1-59259-955-9:439

  • Publisher Name: Humana Press

  • Print ISBN: 978-1-58829-447-0

  • Online ISBN: 978-1-59259-955-4

  • eBook Packages: Springer Protocols

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