Abstract
This chapter describes methods for the production and use of antibody microarrays. The experimental methods are divided into three sections. The first gives information relating to the preparation and handling of antibodies and the production of microarrays. The second relates to the preparation of the samples, from either blood, tissue, or cell lysates. The third section describes methods for using the samples on antibody microarrays. Two related detection methods are described in which the proteins of a sample to be analyzed are labeled with a tag to allow detection after capture on antibody microarrays.
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References
Huang, R.-P., Huang, R., Fan, Y., and Lin, Y. (2001) Simultaneous detection of multiple cytokines from conditioned media and patientās sera by an antibody-based protein array system. Anal. Biochem. 294, 55ā62.
Miller, J. C., Zhou, H., Kwekel, J., et al. (2003) Antibody microarray profiling of human prostate cancer sera: antibody screening and identification of potential biomarkers. Proteomics 3, 56ā63.
Sreekumar, A., Nyati, M. K., Varambally, S., et al. (2001) Profiling of cancer cells using protein microarrays: discovery of novel radiation-regulated proteins. Cancer Res. 61, 7585ā7593.
Knezevic, V., Leethanakul, C., Bichsel, V. E., et al. (2001) Proteomic profiling of the cancer microenvironment by antibody arrays. Proteomics 1, 1271ā1278.
Schweitzer, B., Roberts, S., Grimwade, B., et al. (2002) Multiplexed protein profiling on microarrays by rolling-circle amplification. Nat. Biotechnol. 20, 359ā365.
Haab, B. B., Dunham, M. J., and Brown, P. O. (2001) Protein microarrays for highly parallel detection and quantitation of specific proteins and antibodies in complex solutions. Genome Biol. 2, 1ā13.
Nielsen, U. B., Cardone, M. H., Sinskey, A. J., MacBeath, G., and Sorger, P. K. (2003) Profiling receptor tyrosine kinase activation by using ab microarrays. Proc. Natl. Acad. Sci. USA 100, 9330ā9335.
Lin, Y., Huang, R., Chen, L. P., et al. (2003) Profiling of cytokine expression by biotin-labeled-based protein arrays. Proteomics 3, 1750ā1757.
Tannapfel, A., Anhalt, K., Hausermann, P., et al. (2003) Identification of novel proteins associated with hepatocellular carcinomas using protein microarrays. J. Pathol. 201, 238ā249.
MacBeath, G., and Schreiber, S. L. (2000) Printing proteins as microarrays for high-throughput function determination. Science 289, 1760ā1763.
Zhou, H., Bouwman, K., Schotanus, M., et al. (2004) Two-color, rolling-circle amplification on antibody microarrays for sensitive, multiplexed serum-protein measurements. Genome Biol. 5, R28.
Guschin, D., Yershov, G., Zaslavsky, A., et al. (1997) Manual manufacturing of oligonucleotide, DNA, and protein microchips. Anal. Biochem. 250, 203ā211.
Arenkov, P., Kukhtin, A., Gemmell, A., Voloshchuk, S., Chupeeva, V., and Mirzabekov, A. (2000) Protein microchips: use for immunoassay and enzymatic reactions. Anal. Biochem. 278, 123ā131.
Acknowledgments
This work was funded through the Van Andel Research Institute, the Early Detection Research Network (U01 CA84986), and the Michigan Economic Development Corporation.
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Ā© 2005 Humana Press Inc.
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Haab, B.B. (2005). Multiplexed Protein Analysis Using Antibody Microarrays and Label-Based Detection. In: Joos, T.O., Fortina, P. (eds) Microarrays in Clinical Diagnostics. Methods in Molecular Medicineā¢, vol 114. Humana Press. https://doi.org/10.1385/1-59259-923-0:183
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DOI: https://doi.org/10.1385/1-59259-923-0:183
Publisher Name: Humana Press
Print ISBN: 978-1-58829-394-7
Online ISBN: 978-1-59259-923-3
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