Abstract
Capillary electrophoresis (CE) is experiencing increased use in the field of separation science. Part of its growing popularity of capillary electrophoresis can be attributed to the high efficiency of the separations achievable with the technique, making it an attractive tool for bioanalytical applications. Laser-induced fluorescence (LIF) is a common detection method for CE. One of the problems frequently experienced when using visible LIF detection is matrix autofluorescence which has the effect of degrading the overall sensitivity of the technique. However, the use of near-infrared (NIR) laser induced fluorescence nearly eliminates matrix autofluorescence, as very few molecules have intrinsic fluorescence in this region. This chapter describes the use of covalent and noncovalent labeling schemes for tagging biomolecules with near infrared dyes. To fully appreciate the advantages that the NIR LIF technique can supply, we also review applications that employ detection schemes other than NIR LIF. Specific applications to be discussed include drug-protein studies by CE, as well as capillary electrophoretic immunoassays.
This is a preview of subscription content, log in via an institution.
Buying options
Tax calculation will be finalised at checkout
Purchases are for personal use only
Learn about institutional subscriptionsReferences
Swartz, M. E. (1993) Capillary electrophoretic determination of inorganic ions in a prenatal vitamin formulation. J. Chromatogr. 640, 441–444.
Schwartz, H. E., Ulfelder, J. K., Chen, F. A., and Pentoney, S. L. (1994) The utility of laser-induced fluorescence detection in applications of capillary electrophoresis. J. Capil. Electorophor. 1, 36–54.
Gegendre, B. L., Williams, D. C., Soper, S. A., Erdmann, R., Ortmann, U., and Enderlein, J. (1996) An all solid-state near-infrared time-correlated single photon counting instrument for dynamic lifetime measurements in DNA sequencing applications. Rev. Sci. Instrum. 67, 3984–3989.
Cheng, Y. F. and Dovichi, N. J. (1988) Subattomole amino acid analysis by capillary zone electrophoresis and laser-induced fluorescence. Science 242, 562–564.
Lee, Y. H., Maus, R. G., Smith, B. W., and Winefordner, J. D. (1994) Laser-induced fluorescence detection of a single molecule in a capillary. Anal. Chem. 66, 4142–4149.
Hillebrand, S., Schoffen, J. R., Mandaji, M., et al. (2002) Performance of an ultraviolet light-emitting diode-induced fluorescence detector in capillary electrophoresis. Electrophor. 23, 2445–2448.
Kist, T. B. L., Termignoni, C., and Grieneisen, H.-P. H. (1994) Capillary zone electrophoresis separation of kinins using a novel laser fluorescence detector. Braz. J. Med. Biol. Res. 27, 11–19.
Vicki, L., Ward, M., and Khaledi, G. (1998) Nonaqueous capillary electrophoresis with laser induced fluorescence detection. J. Chromatogr. B 718, 15–22.
Lackowicz, J. R. (1999) Principles of Fluorescent Spectroscopy. Kluwer Academic, New York.
Ingle, J. D. and Crouch, S. R. (1998) Spectrochemical Analysis. Prentice-Hall, Upper Saddle River, NJ, ch. 12.
Davis, G. A. (1972) Dansylglycine as a fluorescent probe for aqueous solutions of cationic detergents. J. Am. Chem. Soc. 94, 5089–5090.
Hinze, W. L. (1979) Solution Chemistry of Surfactants. Plenum, New York.
Legendre, B. L., Dixie, L., Moberg, D. C., and Soper S. A. (1997) Ultrasensitive near-infrared laser-induced fluorescence detection in capillary electrophoresis using a diode laser and avalanche photodiode. J. Chromatogr. A 779, 185–194.
Ummadi, M. and Weimer B. C. (2002) Use of capillary electrophoresis and laser-induced fluorescence for attomole detection of amino acids. J. Chromatogr. A 964, 243–253.
Berquist, J., Vona, M. J., Stiller, C.-O., and O’Connor, W. T. (1996) Capillary electrophoresis with laser-induced fluorescence detection: a sensitive method for monitoring extracellular concentrations of amino acids in the periaqueductal grey matter. J. Neurosci. Methods 65, 33–42.
Strickland, M., Weimer, B. C., and Broadbent, J. R. (1996) Capillary electrophoresis of Cheddar cheese. J. Chromatogr. A 731, 305–313.
Johansson, T., Petersson, M., Johanssons, J., and Nilsson, S. (1999) Real-time imaging through optical fiber array-assisted laser-induced fluorescence of capillary electrophoretic enantiomer separations. Anal. Chem. 71, 4190–4197.
Ward, T. J., Nichols, M., Sturdivant, L., and King, C. C. (1995) Use of organic modifiers to enhance chiral selectivity in capillary electrophoresis. Amino Acids 8, 337–344.
Tyutyulkov, N., Fabian, J., Mehlhorn, A., Dietz, F., and Tadjer, A. (1991) Polymethine Dyes: Structure and Properties. St. Kliment Ohridski University Press, Sofia, Bulgaria.
Hamer, F. M. (1964) The Cyanine Dyes and Related Compounds. Wiley, New York.
Dachne, S., Resch-Genger, U., and Wolfbeis, O. S. (1998) Near Infrared Dyes for High Technology Applications, NATO ASI series. Kluwer Academic, Dordrecht, The Netherlands.
Peters, A. T. and Freedman, H. S. (1995) Modern Colorants: Synthesis and Structure. Blackie Academic and Professional, Glasgow, UK.
Fabian, J., Nakazumi, H., and Matsuoka, M. (1992) Near-infrared absorbing dyes. Chem. Rev. 92, 1197–1226.
Katritzky, A. R. and Sabongi, G. J. (eds.) (1990) Infrared Absorbing Dyes. Plenum, New York.
Rao, T. V. S., Huff, J. B., and Bieniarz, C. (1998) Supramolecular control of photophysical properties of cyanine dyes. Tetrahedron 54, 10,627–10,634.
Lipowska, M., Patonay, G., and Strekowski, L. (1993) New near-infrared cyanine dyes for labeling of proteins. Synth. Commun. 23, 3087–3094.
Strekowski, L., Lipowska, M., and Patonay, G. (1992) Facile derivatizations of heptamethine cyanine dyes. Synth. Commun. 22, 2593–2598.
Strekowski, L., Lipowska, M., and Patonay, G. (1992) Substitution reactions of a nucleofugal group in heptamethine cyanine dyes. Synthesis of an isothiocyanato derivative for labeling of proteins with a near-infrared chromophore. J. Org. Chem. 57, 4578–4580.
Lipowska, M., Patonay, G., and Strekowski, L. (1995) A novel near-infrared cyanine dye for bioanalytical applications. Heterocycl. Commun. 1, 427–430.
Flannagan, J. H., Khan, S. H., Menchen, S., Soper, S. A., and Hammer, R. P. (1997) Functionalized tricarbocyanine dyes as near-infrared fluorescent probes for biomolecules. Bioconjugate Chem. 8, 751–756.
Strekowski, L., Mason, C., Lee, H., and Patonay, G. Synthesis of water-soluble near-infrared cyanine dyes functionalized with [(Succuinimido)oxy]carbonyl group. Heterocycl. Commun., in press
Strekowski, L., Mason, C., Lee, H., et al. Synthesis of a functionalized cyanine dye for covalent labeling of biomolecules with a pH-sensitive chromophore. J. Heterocycl. Chem., in press.
Strekowski, L., Gorecki, T., Mason, J., Lee, H., and Patonay, G. (2001) New heptamethine cyanine reagents for labeling of biomolecules with a near-infrared chromophore. Heterocycl. Commun. 7, 117–122.
Strekowski, L., Lipowska, M., Gorecki, T., Mason, C., and Patonay, G. (1996) Functionalization of near-infrared cyanine dyes. J. Heterocyclic Chem. 33, 1685–1688.
Ernst, L. A., Gupta, R. K., Mujumdar, R. B., and Waggoner, A. S. (1989) Cyanine dye labeling reagents for sulfhydryl groups. Cytometry 10, 3–10.
Gruber, H., Kada, G., Pragl, B., et al. (2000) Preparation of thiol-reactive Cy5 derivatives from commercial Cy5 succinimidyl ester. Bioconj. Chem. 11, 161–166.
Retoff, S. and Larsen, P. R. (1989) Endorcrinology, Vol. 1. Saunders, Philadelphia, PA.
Westphal, U. (1971) Steroid Protein Interactions. Springer-Verlag, New York.
Kwong, T. C. (1985) Free drug measurements: methodologies and clinical significance. Clin. Chim. Acta 151, 193–216.
Svennson, C. K., Woodruff, M. N. Baker J. G., and Lalka, D. (1986) Free drug concentration monitoring in clinical practice. Rational and current status. Clin. Pharmacokin. 11, 450–469.
Barre, J., Didey, F., Delion, F., and Tellerment, J. P. (1998) Problems in therapeutic drug monitoring. Ther. Drug Monit. 10, 133–143.
Levy, R. H. and Schmidt, D. (1985) Utility of free level monitoring of antiepileptic drugs. Epilepsia 26,199–205.
Craig, D. B., and Dovichi, N. J. (1998) Multiple labeling of proteins. Anal. Chem. 70, 2493–2494.
Bao, J. J. (1997) Capillary electrophoretic immunoassays. J. Chromatogr. B 699, 463–480.
Chen, F. T.-A. and Pentoney, J. (1994) Characterization of digoxigenin—labeled B phycoerythrin by capillary electrophoresis with laser induced fluorescence detection. Application to homogenous digoxin immunoassay. J. Chromatogr. 680, 425–450.
Schultz, N. M. and Kennedy, R. T. (1993) Rapid immunoassay using capillary electrophoresis with fluorescence detection. Anal. Chem. 65, 3161–3165.
Tao, L. and Kennedy, R. T. (1996) On line competitive immunoassay for insulin based on capillary electrophoresis with laser induced fluorescence detection. Anal. Chem. 68, 3899–3906.
Towns, J., Bao, J., and Reigner, F. E. (1992) Synthesis and evaluation of epoxy polymer coatings for the analysis of proteins by capillary zone electrophoresis. J. Chromatogr. 599, 227–237.
Xue, Q. and Yeung, E. S. (1995) Differences in chemical reactivity of individual molecules of an enzyme. Nature 373, 681–683.
Legendre, B. L. and Soper S. A. (1996) Binding properties of near IR dyes to proteins and the separation of the dye/protein complexes using capillary electrophoresis with laser induced fluorescence detection. Appl. Spectrosc. 50, 1196.
Peters, T. (1996) All About Albumin: Biochemistry, Genetics and Medical Applications. Academic, San Diego, CA.
Sauda, K., Imasaka, T., and Ishibashi, N. (1986) Determination of protein in human serum by high performance liquid chromatography with semiconductor laser fluorometric detection. Anal. Chem. 58, 2649–2653.
Hage, D. S., Noctor, T. A., and Wainer, I. W. (1995) Characterization of the protein binding of chiral drugs by high performance affinity chromatography, interactions of R-and S-ibuprofen with human serum albumin. J. Chromatogr. A 693, 23–32.
Boga, O. and Borga, B. (1997) Serum protein binding of nonsteroidal anti-inflammatory drugs: a comparative study. J. Pharmacokinet. Biopharm. 25, 63–77.
Sakai, T., Maruyama, T., Sako, T., et al. (1999) Stereoselective serum protein binding of ketoprofen in liver diseases. Enantiomer 4, 477–482.
Sowell, J., Agnew-Heard, K., Mason, J. Ch., Mama, Ch., Strekowski, L., and Patonay, G. (2001) Use of noncovalent labeling in illustrating ligand binding to human serum albumin via affinity capillary electrophoresis with near-infrared laser induced fluorescence detection. J Chromatogr. B 755, 91–99.
Sowell, J., Mason, J. Ch., Strekowski, L., and Patonay, G. (2001) Binding constant determination of drugs toward subdomain IIIA of human serum albumin by near-displacement capillary electrophoresis. Electrophoresis 22, 2512–2517.
Author information
Authors and Affiliations
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2004 Humana Press Inc.
About this protocol
Cite this protocol
Sowell, J., Salon, J., Strekowski, L., Patonay, G. (2004). Covalent and Noncovalent Labeling Schemes for Near-Infrared Dyes in Capillary Electrophoresis Protein Applications. In: Strege, M.A., Lagu, A.L. (eds) Capillary Electrophoresis of Proteins and Peptides. Methods in Molecular Biology™, vol 276. Humana Press. https://doi.org/10.1385/1-59259-798-X:039
Download citation
DOI: https://doi.org/10.1385/1-59259-798-X:039
Publisher Name: Humana Press
Print ISBN: 978-1-58829-017-5
Online ISBN: 978-1-59259-798-7
eBook Packages: Springer Protocols