Skip to main content

ProteinChip® Array-Based Amyloid β Assays

  • Protocol

Part of the book series: Methods in Molecular Biology ((MIMB,volume 264))

Abstract

Amyloid-β (Aβ) fragments are found in plaques of patients with Alzheimers. Three secretases cleave the amyloid precursor protein, producing multiple Aβ fragments that accumulate in the brain and fluids of patients with Alzheimers. Aβ peptides are difficult to detect using standard methods because of their small size and multiple isoforms. However, multiple peptide fragments can be detected using a single ProteinChip Array-Based assay. Specific antibodies recognizing various amyloid epitopes are immobilized on a ProteinChip Array. Crude samples, such as tissue lysates, serum, cerebral spinal fluid (CSF), or cell culture media, are applied to the antibody-coated arrays. Aβ peptides are specifically retained by the antibody, whereas other sample components are removed by washing. The multiple peptide fragments are detected by surface-enhanced laser desorption/ionization time-of-flight mass spectrometry (SELDI-TOF MS), which can easily resolve the different fragments because of the corresponding changes in peptide mass.

This is a preview of subscription content, log in via an institution.

Buying options

Protocol
USD   49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD   109.00
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD   109.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

Springer Nature is developing a new tool to find and evaluate Protocols. Learn more

References

  1. Austen, B. M., Frears, E. R., and Davies, H. (2000) The use of SELDI ProteinChip arrays to monitor production of Alzheimer’s beta-amyloid in transfected cells. J. Pept. Sci. 6, 359–469.

    Article  Google Scholar 

  2. Beher, D., Wrigley, J. D., Owens, A. P., et al. (2002) Generation of C-terminally truncated amyloid-beta peptides is dependent on gamma-secretase activity. J. Neurochem. 82, 563–575.

    Article  PubMed  CAS  Google Scholar 

  3. Cai, H., Wang, Y., McCarthy, D., et al. (2001) BACE1 is the major beta-secretase for generation of beta-amyloid peptides by neurons. Nat. Neurosci. 4, 233, #234.

    Article  PubMed  CAS  Google Scholar 

  4. Shearman, M. S., Beher, D., Clarke, E. E., et al. (2000) L-685, 458, an aspartyl protease transition state mimic, is a potent inhibitor of amyloid beta-protein precursor gamma-secretase activity. Biochemistry 39, 8698–8704.

    Article  PubMed  CAS  Google Scholar 

  5. Vandermeeren, M., Gerarts, M., Pype, S., et al. (2001) The functional gamma-secretase inhibitor prevents production of amyloid beta 1-34 in human and murine cell lines. Neurosci. Lett. 315, 145–148.

    Article  PubMed  CAS  Google Scholar 

  6. Vehmas, A. K., Borchelt, D. R., Price, D. L., et al. (2001) Beta-amyloid peptide vaccination results in marked changes in serum and brain Aβ levels in Appswe/PS1{D}E9 mice, as detected by SELDI-TOF-based ProteinChip® technology. DNA Cell Biol. 11, 713–721.

    Article  Google Scholar 

  7. Chen, F., Yang, D-S., Petanceskaa, S., et al. (2000) Carboxyl-terminal fragments of Alzheimer beta-amyloid precursor protein accumulate in restricted and unpredicted intracellular compartments in presenilin 1-deficient cells. J. Biol. Chem. 275, 36,794–36,802.

    Article  PubMed  CAS  Google Scholar 

  8. Kamal, A., Almenar-Quealt, A., LeBlanc, J. F., et al. (2001) Kinesin-mediated axonal transport of a membrane compartment containing beta-secretase and presenilin-1 requires APP. Nature 414, 643–648.

    Article  PubMed  CAS  Google Scholar 

  9. Sheng, J. G., Price, D. L., and Koliatsos, V. E. (2002) Disruption of corticocortical connections ameliorates amyloid burden in terminal fields in a transgenic model of A-beta amyloidosis. J. Neurosci. 22, 9794–9799.

    PubMed  CAS  Google Scholar 

  10. Terai, K., Iwai, A., Kawabata, S., et al. (2001) Beta-amyloid deposits in transgenic mice expressing human beta-amyloid precursor protein have the same characteristics as those in Alzheimer’s disease. Neuroscience 104, 299–310.

    Article  PubMed  CAS  Google Scholar 

  11. Xiang, Z., Ho, L., Shrishailam, Y., et al. (2002) Cyclooxygenase-2 promotes amyloid plaque deposition in a mouse model of Alzheimer’s disease neuropathology. Gene Expr. 10, 271–278.

    PubMed  CAS  Google Scholar 

  12. Kuo, Y. M., Emmerling, M. R., Lampert, H. C., et al. (1999) High levels of circulating Aβ42 are sequestered by plasma proteins in Alzheimer’s disease. Biochem. Biophys. Res. Commun. 257, 787–791.

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2004 Humana Press Inc., Totowa, NJ

About this protocol

Cite this protocol

Bradbury, L.E., LeBlanc, J.F., McCarthy, D.B. (2004). ProteinChip® Array-Based Amyloid β Assays. In: Fung, E.T. (eds) Protein Arrays. Methods in Molecular Biology, vol 264. Humana Press. https://doi.org/10.1385/1-59259-759-9:245

Download citation

  • DOI: https://doi.org/10.1385/1-59259-759-9:245

  • Publisher Name: Humana Press

  • Print ISBN: 978-1-58829-255-1

  • Online ISBN: 978-1-59259-759-8

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics