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Retrofitting BACs With a Selectable Marker for Transfection

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Bacterial Artificial Chromosomes

Part of the book series: Methods in Molecular Biology ((MIMB,volume 256))

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Abstract

Many functional studies require the transfection of bacterial artificial chromosome (BAC) clones into mammalian cells. Because most BAC vectors do not have a mammalian selection marker or do not have one suitable for all cell types, it is usually necessary to modify BAC clones to include a selection marker, a “retrofitting” process. Different BAC retrofitting strategies have been developed over the last 5 yr and are classified in the reference section (111).

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References

  1. Chatterjee, P. K. and Sternberg, N. L. (1996) Retrofitting high molecular weight DNA cloned in P1: introduction of reporter genes, markers selectable in mammalian cells and generation of nested deletions. Genet. Anal. 13, 33–42.

    PubMed  CAS  Google Scholar 

  2. Mejia, J. E. and Monaco, A. P. (1997) Retrofitting vectors for Escherichia coli-based artificial chromosomes (PACs and BACs) with markers for transfection studies. Genome Res. 7, 179–186.

    Article  PubMed  CAS  Google Scholar 

  3. Yang, X. W., Model, P., and Heintz, N. (1997) Homologous recombination based modification in Escherichia coli and germline transmission in transgenic mice of a bacterial artificial chromosome. Nat. Biotechnol. 15, 859–865.

    Article  PubMed  CAS  Google Scholar 

  4. Hejna, J. A., Johnstone, P. L., Kohler, S. L., et al. (1998) Functional complementation by electroporation of human BACs into mammalian fibroblast cells. Nucl. Acids Res. 26, 1124–1125.

    Article  PubMed  CAS  Google Scholar 

  5. Jessen, J. R., Meng, A., McFarlane, R. J., Paw, B. H., Zon, L. I., Smith, G. R., and Lin, S. (1998) Modification of bacterial artificial chromosomes through chi-stimulated homologous recombination and its application in zebrafish transgenesis. Proc. Natl. Acad. Sci. USA 95, 5121–5126.

    Article  PubMed  CAS  Google Scholar 

  6. Kim, S. Y., Horrigan, S. K., Altenhofen, J. L., Arbieva, Z. H., Hoffman, R., and Westbrook, C. A. (1998) Modification of bacterial artificial chromosome clones using Cre recombinase: introduction of selectable markers for expression in eukaryotic cells. Genome Res. 8, 404–412.

    PubMed  CAS  Google Scholar 

  7. Frengen, E., Weichenhan, D., Zhao, B., Osoegawa, K., van Geel, M., and de Jong, P. J. (1999) A modular, positive selection bacterial artificial chromosome vector with multiple cloning sites. Genomics 58, 250–253.

    Article  PubMed  CAS  Google Scholar 

  8. Muyrers, J. P., Zhang, Y., Testa, G., and Stewart, A. F. (1999) Rapid modification of bacterial artificial chromosomes by ET-recombination. Nucl. Acids Res. 27, 1555–1557.

    Article  PubMed  CAS  Google Scholar 

  9. Narayanan, K., Williamson, R., Zhang, Y., Stewart, A. F., and Ioannou, P. A. (1999) Efficient and precise engineering of a 200 kb beta-globin human/bacterial artificial chromosome in E. coli DH10B using an inducible homologous recombination system. Gene Ther. 6, 442–447.

    Article  PubMed  CAS  Google Scholar 

  10. Wang, Z., Engler, P., Longacre, A., and Storb, U. (2001) An efficient method for high-fidelity BAC/PAC retrofitting with a selectable marker for mammalian cell transfection. Genome Res. 11, 137–141.

    Article  PubMed  CAS  Google Scholar 

  11. Kaname, T. and Huxley, C. (2001) Simple and efficient vectors for retrofitting BACs and PACs with mammalian neor and EGFP marker genes. Gene 266, 147–153.

    Article  PubMed  CAS  Google Scholar 

  12. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular Cloning. Second edition. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.

    Google Scholar 

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© 2004 Humana Press Inc., Totowa, NJ

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Wang, Z., Longacre, A., Engler, P. (2004). Retrofitting BACs With a Selectable Marker for Transfection. In: Zhao, S., Stodolsky, M. (eds) Bacterial Artificial Chromosomes. Methods in Molecular Biology, vol 256. Humana Press. https://doi.org/10.1385/1-59259-753-X:069

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  • DOI: https://doi.org/10.1385/1-59259-753-X:069

  • Publisher Name: Humana Press

  • Print ISBN: 978-0-89603-989-6

  • Online ISBN: 978-1-59259-753-6

  • eBook Packages: Springer Protocols

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