Skip to main content

Micropreparative HPLC of Peptides and Proteins

  • Protocol
HPLC of Peptides and Proteins

Part of the book series: Methods in Molecular Biology™ ((MIMB,volume 251))

  • 3060 Accesses

Abstract

The introduction of high-performance liquid chromatography (HPLC) for the analysis and separation of peptides and proteins in the late 1970s offered unrivalled advantages in terms of speed, resolution, sensitivity, and recovery when used for the purification of low microgram levels of complex mixtures of peptides and proteins (1,2). However, the conventional HPLC columns of typically 4.6 mm id and operated at flow rates of 1 mL/min resulted in peak volumes of approx 1 mL or even larger. The resultant sample concentrations (μg/mL) were not ideally suited to subsequent manipulations, and at such low concentrations, losses caused by nonspecific adsorption on either the chromatographic support or associated equipment (e.g., syringes, sample vials, recovery vials) were commonplace (3,4). Attempts to reduce peak volumes by operating at lower flow rates were shown to be associated with poor recoveries of, in particular, hydrophobic proteins (5,6).

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 129.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 169.00
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. High resolution separation and analysis of biological macromolecules: Part A Fundamentals. (1996) Methods in Enzymol. 270, entire volume.

    Google Scholar 

  2. High resolution separation and analysis of biological macromolecules: Part B Applications. (1996) Methods in Enzymol. 271, entire volume.

    Google Scholar 

  3. Nice, E. C., Simpson, R. J., and Nicola, N. A. (1987) A micropreparative chromatographic strategy for the purification and sequence analysis of murine granulocyte-colony stimulating factor (mG-CSF). Chromatographia 24, 449–468.

    Article  CAS  Google Scholar 

  4. Grego, B., Van Driel, I. R., Goding, J. W., Nice, E. C., and Simpson, R. J. (1986) Use of microbore high-performance liquid chromatography for purifying sub-nanomole levels of polypeptides for microsequencing. Structural studies on the murine plasma cell antigen PC-1. Int. J. Pept. Protein Res. 27, 201–207.

    Article  PubMed  CAS  Google Scholar 

  5. Cooke, N. H., Archer, B. G., O’Hare, M. J., Nice, E. C., and Capp, M. W. (1982) Effect of chain length and carbon load on the performance of alkyl-bonded silicas for protein separations. J. Chromatogr. 255, 115–123.

    Article  Google Scholar 

  6. O’Hare, M. J., Capp, M. W., Nice, E. C., Cooke, N. H., and Archer, B. G. (1982) Factors influencing chromatography of proteins on short alkylsilane-bonded large pore-size silicas. Anal. Biochem. 126, 17–28.

    Article  Google Scholar 

  7. Kucera, P. (1980) Design and use of short microbore columns in liquid chromatography. J. Chromatogr. 198, 93–109.

    Article  CAS  Google Scholar 

  8. Scott, R. P. and Kucera, P. (1979) Use of microbore columns for the separation of substances of biological origin. J. Chromatogr. 185, 27–41.

    Article  PubMed  CAS  Google Scholar 

  9. Alexson, S. E., Finlay, T. H., Hellman, U., Svensson, L. T., Diczfalusy, U., and Eggertsen, G. (1994) Molecular cloning and identification of a rat serum carboxylesterase expressed in the liver. J. Biol. Chem. 269, 17,118–17,124.

    PubMed  CAS  Google Scholar 

  10. Poulter, L., Barratt, D., Scott, C. W., and Caputo, C. B. (1993) Locations and immunoreactivities of phosphorylation sites on bovine and porcine tau proteins and a PHF-tau fragment. J. Biol. Chem. 268, 9636–9644.

    PubMed  CAS  Google Scholar 

  11. Nice, E. C., Catimel, B., Lackmann, M., et al. (1997) Strategies for the identification and purification of ligands for orphan biomolecules. Lett. Peptide Sci. 8, 107–120.

    Google Scholar 

  12. Nice, E. C. (1996) Micropreparative HPLC of proteins and peptides: principles and applications. Biopolymers (Peptide Science) 40, 319–341.

    Article  CAS  Google Scholar 

  13. Nice, E. C., Fabri, L., Hammacher, A., Holden, J., Simpson, R. J., and Burgess, A. W. (1992) The purification of a Rap1 GTPase-activating protein from bovine brain cytosol. J. Biol. Chem. 267, 1546–1553.

    PubMed  CAS  Google Scholar 

  14. Lackmann, M., Bucci, T., Mann, R. J., et al. (1996) Purification of a ligand for the EPH-like receptor HEK using a biosensor-based affinity detection approach. Proc. Natl. Acad. Sci. USA 93, 2523–2527.

    Article  PubMed  CAS  Google Scholar 

  15. Catimel, B., Weinstock, J., Nerrie, M., Domagala, T., and Nice, E. C. (2000) Micropreparative ligand fishing with a cuvette-based optical mirror resonance biosensor. J. Chromatogr. A 869, 261–273.

    Article  PubMed  CAS  Google Scholar 

  16. Catimel, B., Rothacker, J., and Nice, E. (2001) The use of biosensors for microaffinity purification: an integrated approach to proteomics. J. Biochem. Biophys. Meth. 49, 289–312.

    Article  PubMed  CAS  Google Scholar 

  17. Moritz, R. L., Ritter, G., Catimel, B., et al. (1998) Micro-sequencing strategies for the human A33 antigen, a novel surface glycoprotein of human gastrointestinal epithelium. J. Chromatogr. A. 798, 91–101.

    Article  PubMed  CAS  Google Scholar 

  18. Nice, E., Lackmann, M., Smyth, F., Fabri, L., and Burgess, A. W. (1994) Synergies between micropreparative high-performance liquid chromatography and an instrumental optical biosensor. J. Chromatogr. A 660, 169–185.

    Article  PubMed  CAS  Google Scholar 

  19. Kirkland, J. J., Yau, W. W., Stoklosa, H. J., and Dilks, C. H., Jr. (1977) Sampling and extra-column effects in high-performance liquid chromatography; influence of peak skew on plate count calculations. J. Chromatogr. Sci. 15, 303–316.

    PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2004 Humana Press Inc.

About this protocol

Cite this protocol

Nice, E.C., Aguilar, MI. (2004). Micropreparative HPLC of Peptides and Proteins. In: Aguilar, MI. (eds) HPLC of Peptides and Proteins. Methods in Molecular Biology™, vol 251. Springer, Totowa, NJ. https://doi.org/10.1385/1-59259-742-4:165

Download citation

  • DOI: https://doi.org/10.1385/1-59259-742-4:165

  • Publisher Name: Springer, Totowa, NJ

  • Print ISBN: 978-0-89603-977-3

  • Online ISBN: 978-1-59259-742-0

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics