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Detection of Pathogenic Yersinia enterocolitica by a Swab Enrichment PCR Procedure

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PCR Detection of Microbial Pathogens

Part of the book series: Methods in Molecular Biology™ ((MIMB,volume 216))

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Abstract

The Gram-negative Yersinia genus belongs to the family of Enterobacteriaceae, in which 3 of the 11 Yersinia species are recognized as human pathogens, namely Y. pestis (the etiological factor of plague), Y. pesudotuberculosis, and Y. enterocolitica (the causative agents for yersiniosis) (1). The rest of the genus is composed of Y. ruckeri (a fish pathogen) and the Y. enterocolitica-like organisms (2,3), which have been biochemically classified as 7 species: Y. fredriksenii, Y. kristensenii, Y. intermedia, Y. aldovae, Y. rohdei, Y. mollaretii, and Y. bercoveri (4–7). The heterogeneous composition of Y. enterocolitica, with respect to phenotypic and genotypic properties, is problematic from an analytical point of view; the species being distinguished by 6 biogroups (8) and more than 60 serotypes (9).

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References

  1. Schiemann, D.A. ( 1989) Yersinia enterocolitica and Yersinia pseudotuberculo-sis, in Foodborne Bacterial Pathogens 1st ed. (Doyle, M. P. ed.), Marcel Dekker, New York, USA, pp. 601–672.

    Google Scholar 

  2. Nesbakken, T. and Kapperud, G. (1985) Yersinia enterocolitica and Yersinia enterocolitica-like bacteria in Norwegian slaughter pigs. Int. J. Food Microbiol. 1, 301–309.

    Article  Google Scholar 

  3. Kapperud, G. (1991) Yersinia enterocolitica in food hygiene. Int. J. Food Microbiol. 12, 53–65.

    Article  PubMed  CAS  Google Scholar 

  4. Aleksic, S., Steigerwalt, A.G., Bockemühl, J., G.P., Hartley-Carter, G. P., and Brenner, D.J. (1987) Yersinia rohdei sp. nov. isolated from human and dog feces and surface water. Int. J. Syst. Bact. 37, 327–332.

    Article  Google Scholar 

  5. Bercovier, H., Steigerwalt, A.G., Guiyoule, A., Huntley-Carter, G.P. and Brenner, D.J. (1984) Yersinia aldovae (formerly Yersinia enterocolitica-like group X2): a new species of Enterobacteriaceae isolated from aquatic ecosystems. Int. J. Syst. Bact. 34, 166–172.

    Article  Google Scholar 

  6. Brenner, H., Ursing, J., Bercovier, H., et al. (1980) Deoxyribonucleic acid relat-edness in Yersinia enterocolitica and Yersinia enterocolitica-like organisms. Curr. Microbiol. 4, 195–200.

    Article  CAS  Google Scholar 

  7. Wauters, G., Janssens, M., Steigerwalt, A. G., and Brenner, D. J. (1988) Yersinia mollaretii sp. nov. and Yersinia bercovieri sp. nov., formerly called Yersinia enterocolitica biogroups 3 A and 3B. Int. J. Syst. Bact. 38, 424–429.

    Article  Google Scholar 

  8. Wauters, G., Kandolo, K. and Janssens, M. (1987) Revised biogrouping scheme of Yersinia enterocolitica. Contrib. Microbiol. Immunol. 9, 14–21.

    CAS  Google Scholar 

  9. Wauters, G. ( 1981) Antigens of Yersinia enterocolitica, in Yersinia enterocolitica. (Bottone, E.J., ed.), CRC Press, Boca Raton, FL, USA, pp. 41–53.

    Google Scholar 

  10. Mollaret, H. H., Bercovier, H., and Alonso, J. M. (1979) Summary of the data received at the WHO Reference Center for Yersinia enterocolitica. Contrib. Microbiol. Immunol. 5, 174–184.

    CAS  Google Scholar 

  11. Bottone, E. J. (1997) Yersinia enterocolitica: the charisma continues. Clin.Microbiol. Rev. 10, 257–276.

    PubMed  CAS  Google Scholar 

  12. Cornelis, G. R., Boland, A., Boyd, A. P., et al. (1998) The virulence plasmid of Yersinia, an antihost genome. Microbiol. Mol. Biol. Rev. 62, 1315–1352.

    PubMed  CAS  Google Scholar 

  13. Neubauer, H., Aleksic, S., Hensel, A., Finke, E. J., and Meyer, H. (2000) Yersinia enterocolitica 16S rRNA gene types belong to the same genospecies but form three homology groups. Int. J. Med. Microbiol. 290, 61–64.

    PubMed  CAS  Google Scholar 

  14. ISO (1994) Microbiology: General Guidence for the Detection of Presumptive Pathogenic Yersinia enterocolitica. Draft International Organization for Standardization, ISO/DIS 10273.

    Google Scholar 

  15. NMKL-117 (1987) Nordic Committee on Food Analysis NMKL-117: Yersinia enterocolitica. Detection in food, 2nd ed. Nordic Committee on Food Analysis, Esbo, Finland.

    Google Scholar 

  16. Kotula, A. W., and Sharar, A. K. (1993) Presence of Yersinia enterocolitica sero-type O:5,27 in slaughter pigs. J. FoodProt. 56, 215–218.

    Google Scholar 

  17. Schiemann, D. A., and Olson, S. A. (1984) Antagonism by gram-negative bacteria to growth of Yersinia enterocolitica in mixed cultures. Appl. Environ.Microbiol. 48, 539–544.

    PubMed  CAS  Google Scholar 

  18. Kleinlein, N. and Untermann, F. (1990) Growth of pathogenic Yersinia enterocolitica strains in minced meat with and without protective gas with consideration of the competitive background flora. Int. J. Food Microbiol. 10, 65–71.

    Article  PubMed  CAS  Google Scholar 

  19. Schiemann, D. A. (1982) Development of a two-step enrichment procedure for recovery of Yersinia enterocolitica from food. Appl. Environ. Microbiol. 43, 14–27.

    PubMed  CAS  Google Scholar 

  20. Funk, J. A., Troutt, H. F., Isaacson, R. E., and Fossler, C.P. (1998) Prevalence of pathogenic Yersinia enterocolitica in groups of swine at slaughter. J. Food Prot. 61, 677–682.

    PubMed  CAS  Google Scholar 

  21. de Boer, E. ( 1995) Isolation of Yersinia enterocolitica from foods, in Culture Media for Food Microbiology, vol. 34, Progress in Industrial Microbiology, (Corry, J. E. L., Curtis, G. D. W., and Baird, R. M., ), Elsevier Science B.V., Amsterdam, Netherlands, pp. 219–228.

    Chapter  Google Scholar 

  22. Neubauer, H., Sprague, L. D., Scholz, H., and Hensel, A. (2001) The diagnostics of Yersinia enterocolitica infections: a review on classical identification techniques and new molecular biological methods. Berl. Münch. Tierärztl. Wochenschr. 114, 1–7.

    PubMed  CAS  Google Scholar 

  23. Hill, W. E. (1996) The polymerase chain reaction: applications for the detection of foodborne pathogens. Crit Rev. Food Sci. Nutr. 36, 123–173.

    Article  PubMed  CAS  Google Scholar 

  24. Fredriksson-Ahomaa, M., Hielm, S. and Korkeala, H. (1999) High prevalence of yadA-positive Yersinia enterocolitica in pig tongues and minced meat at the retail level in Finland. J. Food. Prot. 62, 123–127.

    PubMed  CAS  Google Scholar 

  25. Jourdan, A. D., Johnson, S. C., and Wesley, I. V. (2000) Development of a fluorogenic 5′ nuclease PCR assay for detection of the ail gene of pathogenic Yersinia enterocolitica. Appl. Environ. Microbiol. 66, 3750–3755.

    Article  CAS  Google Scholar 

  26. Bhaduri, S., and Cottrell, B. (1998) A simplified sample preparation method from various foods for PCR detection of pathogenic Yersinia enterocolitica: a possible model for other food pathogens. Mol. Cell. Probes 12, 79–83.

    Article  PubMed  CAS  Google Scholar 

  27. Vishnubhatla, A., Fung, D. Y., Oberst, R. D., Hays, M. P., Nagaraja, T. G., and Flood, S. J. (2000) Rapid 5′ nuclease (Taq Man) assay for detection of virulent strains of Yersinia enterocolitica. Appl. Environ. Microbiol. 66, 4131–4135.

    Article  CAS  Google Scholar 

  28. NMKL-163 (1998) Nordic committee on food analysis NMKL-163: Pathogenic Yersinia enterocolitica. PCR methods for detection in food. Esbo, Finland.

    Google Scholar 

  29. Lantz, P.G., Knutsson, R., Blixt, Y., Abu Al-Soud, W., Borch, E. and Rådström, P. (1998) Detection of pathogenic Yersinia enterocolitica in enrichment media and pork by a multiplex PCR: a study of sample preparation and PCR-inhibitory components. Int. J. Food Microbiol. 45, 93–105.

    Article  PubMed  CAS  Google Scholar 

  30. Knutsson, R., Fontanesi, M., Grage, H. and Rådström, P. (2002) Development of a PCR-compatible enrichment medium for Yersinia enterocolitica: amplification precision and dynamic detection range during cultivation. Int. J. Food Microbiol. 72, 185–201.

    Article  PubMed  CAS  Google Scholar 

  31. ISO 3100-2 (1988) Meat and meat products-Sampling and preparation of test-Part 2: preparation of test samples for microbiological examination. International Organization for Standardization, Switzerland.

    Google Scholar 

  32. DIN 10113-1. (1997) Enumeration of viable aerobic bacteria of surfaces of utensils and equipment in contact with food. Deutsches Institut für Normung e.V. Berlin, Germany.

    Google Scholar 

  33. Knutsson, R., Blixt, Y., Grage, H., Borch, E., and Rådström, P. (2002) Evaluation of selective enrichment PCR procedures for Yersinia enterocolitica. Int. J. Food Microbiol. 73, 35–46.

    Article  CAS  Google Scholar 

  34. Heesemann, J., Keller, C., Morawa, R., Schmidt, N., Siemens, H. J., and Laufs, R. (1983) Plasmids of human strains of Yersinia enterocolitica: molecular related-ness and possible importance for pathogenesis. J. Infect. Dis. 147, 107–115.

    PubMed  CAS  Google Scholar 

  35. Heesemann, J. and Grüter, L. (1987) Genetic evidence that outer membrane protein YOP1 of Yersinia enterocolitica mediates adherence and phagocytosis resistance to human epithelial cell. FEMS Microbiol. Lett. 40, 37–41.

    Article  CAS  Google Scholar 

  36. Ruckdeschel, K., Roggenkamp, A., Schubert, S., and Heesemann, J. (1996) Differential contribution of Yersinia enterocolitica virulence factors to evasion of microbicidal action of neutrophils. Infect. Immun. 64, 724–733.

    PubMed  CAS  Google Scholar 

  37. Gray, M. W., Sankoff, D., and Cedergren, R. J. (1984) On the evolutionary descent of organisms and organelles: a global phylogeny based on a highly conserved structural core in small subunit ribosomal RNA. Nucleic Acids Res. 12, 5837–5852.

    Article  PubMed  CAS  Google Scholar 

  38. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular cloning: a laboratory manual, 2nd ed., CSH Laboratory Press, Cold Spring Habor, New York, USA.

    Google Scholar 

  39. Abu Al-Soud, W. and Rådström, P. (1998) Capacity of nine thermostable DNA polymerases to mediate DNA amplification in the presence of PCR-inhibiting samples. Appl. Environ. Microbiol. 64, 3748–3753.

    PubMed  CAS  Google Scholar 

  40. Abu Al-Soud, W., and Rådström, P. (2000) Effects of amplification facilitators on diagnostic PCR in the presence of blood, feces, and meat. J. Clin. Microbiol. 38, 4463–4470.

    PubMed  CAS  Google Scholar 

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Knutsson, R., Rådström, P. (2003). Detection of Pathogenic Yersinia enterocolitica by a Swab Enrichment PCR Procedure. In: Sachse, K., Frey, J. (eds) PCR Detection of Microbial Pathogens. Methods in Molecular Biology™, vol 216. Humana Press. https://doi.org/10.1385/1-59259-344-5:311

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  • DOI: https://doi.org/10.1385/1-59259-344-5:311

  • Publisher Name: Humana Press

  • Print ISBN: 978-1-58829-049-6

  • Online ISBN: 978-1-59259-344-6

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