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Characterization of Bovine Spongiform Encephalopathy and Scrapie Strains/Isolates by Immunochemical Analysis of PrPSc

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Part of the book series: Methods in Molecular Medicine™ ((MIMM,volume 59))

Abstract

In the past two decades, thoroughly standardized mouse incubation time and brain lesion profile scoring assays have been developed to discriminate between prion strains. However, in these mouse infection experiments, large numbers of animals (about 20 mice/line) from three different highly inbred mouse lines (C57Bl, VM95, RIII), plus their intercrosses, need to be infected, and their brain tissues subsequently examined (1-8). Although results obtained are highly reliable, the effort and time needed for conducting these experiments are considerable. Therefore, alternative criteria and techniques have been developed to characterize transmissible spongiform encephalopathy (TSE) agents. Prion infections are accompanied by the accumulation of an abnormal isoform (designated PrPSc) of normal host-encoded prion protein (PrPC). Both isoforms have the same amino acid sequence and molecular mass, but differ significantly in their three-dimensional structure and biochemical characteristics. The three-dimensional structure of PrPC is characterized by a high ?-helical content (9); all or part of it undergoes a posttranslational modification to β-sheet in PrPSc (10-12). Although PrPC (33-35 kDa) is completely hydrolyzed by protease treatment, PrPSc is partially resistant to proteinase K(PK) as 62 N-terminal amino acids are cleaved, leaving a core fragment of approx 141 amino acids (27-30 kDa) unhydrolyzed (13).

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References

  1. Fraser, H. and Dickinson, A. G. (1973) Scrapie in mice. Agent-strain differences in the distribution and intensity of grey matter vacuolation. J. Comp. Pathol. 83, 29–40.

    Article  PubMed  CAS  Google Scholar 

  2. Outram, G. W., Fraser, H., and Wilson, D. T. (1973) Scrapie in mice. Some effects on the brain lesion profile of ME7 agent due to genotype of donor, route of injection and genotype of recipient. J. Comp.Pathol. 83, 19–28.

    Article  PubMed  CAS  Google Scholar 

  3. Fraser, H. (1976) The pathology of a natural and experimental scrapie. Frontiers Biol. 44, 267–305.

    CAS  Google Scholar 

  4. Bruce, M. E., McBride, P. A., Jeffrey, M., and Scott, J. R. (1994) PrP in pathology and pathogenesis in scrapie-infected mice. Mol. Neurobiol. 8, 105–112.

    Article  PubMed  CAS  Google Scholar 

  5. Fraser, H., Bruce, M. E., and McConnell, I. (1991) Murine scrapie strains, BSE models and genetics, in Sub-Acute Spongiform Encephalopathies (Bradley, R., Savey, M. and Marchant, B. eds.), Kluwer, Dordrecht, The Netherlands, pp. 131–136.

    Google Scholar 

  6. Bruce, M., Chree, A., McConnell, I., Brown, K., and Fraser, H. (1996) Transmission and strain typing studies of scrapie and bovine spongiform encephalopathy, in Transmissible Subacute Spongiform Encephalopathies: Prion Diseases (Court, L. and Dodet, B., eds.), Elsevier, Paris. pp. 259–262.

    Google Scholar 

  7. Bruce, M. E. and Dickinson, A. G. (1987) Biological evidence that scrapie agent has an independent genome. J. Gen.Virol 68, 79–89.

    Article  PubMed  Google Scholar 

  8. Bruce, M. E. (1996) Strain typing studies of scrapie and BSE, in Prion Diseases (Baker, H. F. and Ridley, R. M., eds.), Humana, Totowa, NJ pp. 223–236.

    Chapter  Google Scholar 

  9. Riek, R., Hornemann, S., Wider, G., Billeter, M., Glockshuber, R., and Wuthrich, K. (1996) NMR structure of the mouse prion protein domain PrP(121-321). Nature 382, 180–182.

    Article  PubMed  CAS  Google Scholar 

  10. Pan, K. M., Baldwin, M., Nguyen, J., Gasset, M., Serban, A., Groth, D., et al. (1993) Conversion of alpha-helices into beta-sheets features in the formation of the scrapie prion proteins. Proc. Natl. Acad. Sci. USA 90, 10,962–10,966.

    Article  PubMed  CAS  Google Scholar 

  11. Pergami, P., Jaffe, H., and Safar J. (1996) Semipreparative chromatographic method to purify the normal cellular isoform of the prion protein in nondenatured form. Analyt. Biochem. 236, 63–73.

    Article  PubMed  CAS  Google Scholar 

  12. Safar, J., Roller, P. P., Gajdusek, D. C., and Gibbs, C. J. Jr., (1993) Conformational transitions, dissociation, and unfolding of scrapie amyloid (prion) protein. J. Biol. Chem. 268, 20,276–20,284.

    PubMed  CAS  Google Scholar 

  13. Oesch, B., Westaway, D., Walchli, M., McKinley, M. P., Kent, S. B., Aebersold, R. et al. (1985) A cellular gene encodes scrapie PrP 27-30 protein. Cell 40; 735–746.

    Article  PubMed  CAS  Google Scholar 

  14. Kascsak, R. J., Rubenstein, R., Merz, P. A., Carp, R. I., Wisniewski, H. M., and Diringer, H. (1985) Biochemical differences among scrapie-associated fibrils support the biological diversity of scrapie agents. J. Gen. Virol. 66, 1715–1722.

    Article  PubMed  CAS  Google Scholar 

  15. Kascsak, R. J., Rubenstein, R., Merz, P. A., Carp, R. I., Robakis, N. K., Wisniewski, H. M., and Diringer, H. (1986) Immunological comparison of scrapie-associated fibrils isolated from animals infected with four different scrapie strains. J. Virol. 59, 676–683.

    PubMed  CAS  Google Scholar 

  16. Bessen, R. A. and Marsh, R. F. (1992) Biochemical and physical properties of the prion protein from two strains of the transmissible mink encephalopathy agent. J. Virol. 66, 2096–2101.

    PubMed  CAS  Google Scholar 

  17. Marsh, R. F. and Bessen, R. A. (1994) Physicochemical and biological characterizations of distinct strains of the transmissible mink encephalopathy agent. Phil. Trans. Roy. Soc. London-Series B: Biol. Sci. 343, 413–414.

    Article  CAS  Google Scholar 

  18. Collinge, J., Sidle, K. C., Meads, J., Ironside, J., and Hill, A. F. (1996) Molecular analysis of prion strain variation and the aetiology of ‘new variant’ CJD. Nature 383, 685–690.

    Article  PubMed  CAS  Google Scholar 

  19. Parchi, P., Capellari, S., Chen, S. G., Petersen, R. B., Gambetti, P., Kopp, N. et al. (1997) Typing prion isoforms. Nature 386, 232–234.

    Article  PubMed  CAS  Google Scholar 

  20. Cardone, F., Liu, Q. G., Petraroli, R., Ladogana, A., D’Alessandro, M., Arpino, C., et al. (1999) Prion protein glycotype analysis in familial and sporadic Creutzfeldt-Jakob disease patients. Brain Res. Bull. 49, 429–433.

    Article  PubMed  CAS  Google Scholar 

  21. Wadsworth, J. D., Hill, A. F., Joiner, S., Jackson, G. S., Clarke, A. R., and Collinge, J. (1999) Strain-specific prion-protein conformation determined by metal ions. Nat. Cell Biol. 1, 55–59.

    Article  PubMed  CAS  Google Scholar 

  22. Endo, T., Groth, D., Prusiner, S. B., and Kobata, A. (1989) Diversity of oligosaccharide structures linked to asparagines of the scrapie prion protein. Biochemistry 28, 8380–8388.

    Article  PubMed  CAS  Google Scholar 

  23. Somerville, R. A., Chong, A., Mulqueen, O. U., Birkett, C. R., Wood, S. C., and Hope, J. (1997) Biochemical typing of scrapie strains. Nature 386, 564–564.

    Article  PubMed  CAS  Google Scholar 

  24. Hope, J., Reekie, L. J., Hunter, N., Multhaup, G., Beyreuther, K., White, H., et al. (1988) Fibrils from brains of cows with new cattle disease contain scrapie-associated protein. Nature 336, 390–392.

    Article  PubMed  CAS  Google Scholar 

  25. Somerville, R. A. (1999) Host and transmissible spongiform encephalopathy agent strain control glycosylation of PrP. J. Gen. Virol. 80, 1865–1872.

    PubMed  CAS  Google Scholar 

  26. Kuczius, T., Haist, I., and Groschup, M. H. (1998) Molecular analysis of bovine spongiform encephalopathy and scrapie strain variation. J. Infect. Dis. 178, 693–699.

    Article  PubMed  CAS  Google Scholar 

  27. Baron, T. G., Madec, J. Y., and Calavas, D. (1999) Similar signature of the prion protein in natural sheep scrapie and bovine spongiform encephalopathy-linked diseases. J. Clin. Microbiol. 37, 3701–3704.

    PubMed  CAS  Google Scholar 

  28. Sweeney, T., Kuczius, T., McElroy, M., Gomerez-Parada, M., Groschup, M. H. (2000) Molecular Analysis of Irish scrapie cases. J. Gen. Virol. 6, 1621–1627.

    Google Scholar 

  29. Hill, A. F., Butterworth, R. J., Joiner, S., Jackson, G., Rossor, M. N., Thomas, D. J, et al. (1999) Investigation of variant Creutzfeldt-Jakob disease and other human prion diseases with tonsil biopsy samples. Lancet 353, 183–189.

    Article  PubMed  CAS  Google Scholar 

  30. Buschmann, A., Kuczius, T., Bodemer, W., and Groschup, M. H. (1998) Cellular prion proteins of mammalian species display an intrinsic partial proteinase K resistance. Biochem. Biophys. Res. Commun. 253, 693–702.

    Article  PubMed  CAS  Google Scholar 

  31. Groschup, M. H. and E. Pfaff (1993) Studies on a species-specific epitope in murine, ovine and bovine prion protein. J. Gen. Virol 74, 1451–1456.

    Article  PubMed  CAS  Google Scholar 

  32. Kascsak, R. J., Rubenstein, R., Merz, P. A., Tonna-DeMasi, M., Fersko, R., Carp, R. I., et al. (1987) Mouse polyclonal and monoclonal antibody to scrapie-associated fibril proteins. J. Virol. 61, 3688–3693.

    PubMed  CAS  Google Scholar 

  33. Vorberg, I., Buschmann, A., Harmeyer, S., Saalmuller, A., Pfaff, E., and Groschup, M. H. (1999) A novel epitope for the specific detection of exogenous prion proteins in transgenic mice and transfected murine cell lines. Virology 255, 26–31.

    Article  PubMed  CAS  Google Scholar 

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Groschup, M.H., Junghans, F., Eiden, M., Kuczius, T. (2001). Characterization of Bovine Spongiform Encephalopathy and Scrapie Strains/Isolates by Immunochemical Analysis of PrPSc. In: Baker, H.F. (eds) Molecular Pathology of the Prions. Methods in Molecular Medicine™, vol 59. Humana Press. https://doi.org/10.1385/1-59259-134-5:71

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  • DOI: https://doi.org/10.1385/1-59259-134-5:71

  • Publisher Name: Humana Press

  • Print ISBN: 978-0-89603-924-7

  • Online ISBN: 978-1-59259-134-3

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