Skip to main content

Quantitation of FISH Signals in Archival Tumors

  • Protocol
Book cover Ovarian Cancer

Part of the book series: Methods in Molecular Medicine™ ((MIMM,volume 39))

  • 920 Accesses

Abstract

The term interphase cytogenetics was first used in 1986 by Cremer (1,2) to describe detection of chromosomal alterations using in situ techniques in interphase nuclei. This was a distinct advantage over conventional analyses as solid tumors could now be studied (2,3) and the possibility of applying the technique to specimens received in a diagnostic laboratory realised (4). The nonradioactive in situ method, fluorescence in situ hybridization (FISH), has been widely applied to study chromosomal rearrangements, malignancies, and chromosome mapping (4).

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 129.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 169.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 219.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Hopman, A. H. N., Ramaekers, F. C. S., Raap, A. K., Beck, J. L. M., Devilee, P., van der Ploeg, M., and Vooijs, G. P. (1988) In situ hybridisation as a tool to study numerical chromosome aberrations in solid bladder tumors. Histochem. 89, 307–316.

    Article  CAS  Google Scholar 

  2. Wolfe, K. Q. and Herrington, C. S. (1997) Interphase cytogenetics and pathology: a tool for diagnosis and research. Mini review. J. Pathol. 181, 359–361.

    Article  CAS  PubMed  Google Scholar 

  3. Mark, H. F. L., Jenkins, R., and Miller, W. A. (1997) Current applications of molecular cytogenetic technologies. Review. Ann. Clin. Lab. Sci. 27, 47–56.

    CAS  PubMed  Google Scholar 

  4. Price, C. M. (1993) Fluorescence in situ hybridisation. Blood Rev. 7, 127–134.

    Article  CAS  PubMed  Google Scholar 

  5. Hopman, A. H. N., van Hooren, E., van de Kaa, C. A., Vooijs, P. G. P., and Ramaekers, F. C. S. (1991) Detection of numerical chromosome aberrations using in situ hybridization in paraffin sections of routinely processed bladder cancers. Mod. Pathol. 4, 503–513.

    CAS  PubMed  Google Scholar 

  6. Waldman, F. M., Carroll, P. R., Kerschmann, R., Cohen, M. B., Field, F. G., and Mayall, B. H. (1991) Centromeric copy number of chromosome 7 is strongly correlated with tumour grade and labelling index in human bladder cancer. Canc. Res. 51, 3807–3813.

    CAS  Google Scholar 

  7. Macoska, J. A., Micale, M. A., Sakr, W. A., Benson, P. D., and Wolman, S. R. (1993) Extensive genetic alterations in prostate cancer revealed by dual PCR and FISH analysis. Genes, Chromos. Cancer 8, 88–97.

    Article  CAS  Google Scholar 

  8. Sauter, G., Deng, G., Moch, H., Kerschmann, R., Matsumara, K., De Vries, S., etal. (1994) Physical deletion of the p53 gene in bladder cancer. Detection by fluorescence in situ hybridization. Am. J. Pathol. 144, 756–766.

    CAS  Google Scholar 

  9. Sauter, G., Moch, H., Carroll, P., Kerschmann, R., Mihatsch, M. J., and Waldman, F. M. (1995) Chromosome-9 loss detected by fluorescence in situ hybridization in bladder cancer. Int. J. Cancer 64, 99–103.

    Article  CAS  PubMed  Google Scholar 

  10. Murphy, D. S., McHardy, P., Coutts, J., Mallon, E. A., George, W. D., Kaye, S. B., et al. (1995) Interphase cytogenetic analysis of erbB2 and topoII⇌r co-amplification in invasive breast cancer and polysomy of chromosome 17 in ductal carcinoma in situ. Int. J. Cancer 64, 18-26.

    Google Scholar 

  11. Pycha, A., Mian, C., Haitel, A., Hofbauer, J., Wiene, H., and Marberger, M. (1997) Fluorescence in situ hybridization identifies more aggressive types of primary non invasive (stage pTa) bladder cancer.J. Urol. 157, 2116–2119.

    Article  CAS  PubMed  Google Scholar 

  12. Wolman, S. R. (1994) Fluorescence in situ hybridization; a new tool for the pathologist. Human Pathol. 25, 586–590.

    Article  CAS  Google Scholar 

  13. Pahphlatz, M. M. M., de Wilde, P. C. M., Poddighe, P., Dekken, H. V., Vooijs, G. P., and Hanselaar, A. G. J. M. (1995) A model for evaluation of in situ hybridisation spot-count distributions in tissue sections. Cytometry 20, 193–202.

    Article  Google Scholar 

  14. Visscher, D. W., Wallis, T., and Ritchie, C. A. (1995) Detection of chromosome aneuploidy in breast lesions with fluorescence in situ hybridization: comparison of whole nuclei to thin tissue sections and correlation with flow cytometric DNA analysis. Cytometry 21, 95–100.

    Article  CAS  PubMed  Google Scholar 

  15. Coignet, L. J. A., Van de Rijke, F. M., Vrolijk, J., Bertheas, M. F., Raap, A. K., and Tanke, H. J. (1996) Automated spot counting of in situ hybridization dots in interphase cells of leukemia samples. Leukemia 10, 1065–1071.

    CAS  PubMed  Google Scholar 

  16. Bartlett, J. M. S., Watters, A. D., Ballantyne, S. A., Going, J. J., Grigor, K. M., and Cooke, T. G. (1998) Quantitative FISH: is chromosome 9 loss a marker of disease recurrence in TCC of the bladder? Brit. J. Cancer, 77, 2193–2198.

    Article  CAS  PubMed  Google Scholar 

  17. Warford, T. (1994) An overview of in situ hybridisation, in A Guide to in situ, Hybaid Ltd., UK.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2000 Humana Press Inc.

About this protocol

Cite this protocol

Watters, A.D., Bartlett, J.M.S. (2000). Quantitation of FISH Signals in Archival Tumors. In: Bartlett, J.M.S. (eds) Ovarian Cancer. Methods in Molecular Medicine™, vol 39. Humana Press. https://doi.org/10.1385/1-59259-071-3:253

Download citation

  • DOI: https://doi.org/10.1385/1-59259-071-3:253

  • Publisher Name: Humana Press

  • Print ISBN: 978-0-89603-583-6

  • Online ISBN: 978-1-59259-071-1

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics