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Quantification of Cytochrome P450 Gene Expression by RNase Protection Analysis

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Part of the book series: Methods in Molecular Biology™ ((MIMB,volume 107))

Abstract

Many attempts to describe the regulation of mdivldual cytochrome P450 (CYP) gene products in animal tissues have been frustrated by the lack of sensitivity and specificity of the assays used. Most enzymatic assays are hampered by the overlapping substrate specificity of these enzymes, and the generation of high-affinity antibodies that are specific for individual isoforms is not a trivial task. Many CYP isoforms have close relatives, some of which can have as much as 98% identity at the RNA nucleotlde-sequence level, and filter-hybridization techniques using labeled cDNA probes are unable to dlscrlminate between such mRNAs. Although noncoding portions of the cDNAs may be used as probes, as they are more likely to offer regions of divergence within subfamllles, this is not often possible because

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References

  1. Myers, R M, Latin, Z, and Martians, T. (1985) Detection of single base pair mismatches by RNase protectton. Sczence 230, 1242–1246

    Article  CAS  Google Scholar 

  2. Akrawi, M, Rogters, V, Vandenberghe, Y, Palmer, N, Vercruysse, A., Shephard, E A., and Phtllips, I. R (1993) Maintenance and mductton in co-cul-tured rat hepatocytes of components of the cytochrome P450-mediated mono-oxygenase. Blochem Pharmacol 45, 1583–1591

    Article  CAS  Google Scholar 

  3. Tapner, M., Liddle, C., Goodwin, B., George, J, and Farrell, G C (1996) Inter-feron gamma down-regulates cytochrome P4503A genes in primary cultures of well-differentiated rat hepatocytes. Hepatology 24, 367–373

    PubMed  CAS  Google Scholar 

  4. Palmer, C N, Richardson, T H, Griffin, K J, Hsu, M H, Muerhoff, A S, Clark, J. E, and Johnson, E F (1993) Characterization of a cDNA encoding a human kidney, cytochrome P—4504A fatty acid omega-hydroxylase and the cognate enzyme expressed in Eschertchia coli Biochim Biophys Acta 1172, 161–166.

    PubMed  CAS  Google Scholar 

  5. Corrm, C., Feletou, M, Canet, E., and Vanhoutte, P. M (1996) Inhtbnors of the cytochrome P450-mono-oxygenase and endothelium-dependent hyperpolartza-tions in the guinea-pig isolated carotid artery Br J Pharmacol 117, 607–610

    Google Scholar 

  6. Roman, L J, Palmer, N, Clark, J. E, Muerhoff, A S., Griffin, K J, Johnson, E F, and Masters, B. S. (1993) Expression of rabbit cytochromes P4504A which catalyze the omega-hydroxylatton of arachtdomc acid, fatty actds, and prostag-landins. Arch Blochem Bzophys 307, 57–65

    Article  CAS  Google Scholar 

  7. Palmer, C N A., Hsu, M. H., Griffin, K J, Raucy, J L., and Johnson, E F., (1998) Peroxisome proliferator activated receptor-α expression in human hver Mol. Pharmacol. 53, 14–22.

    PubMed  CAS  Google Scholar 

  8. Czerwmski, M, McLemore, T L., Gelboin, H V, and Gonzalez, F. J (1994) Quanttfication of CYP2B7, CYP4B1, and CYPOR messenger RNAs in normal human lung and lung tumors Cancer Res. 54, 1085–1091

    Google Scholar 

  9. Shephard, E A., Palmer, C. N., Segall, H J, and Phillips, I. R (1992) Quanttflca-tion of cytochrome P450 reductase gene expression in human tissues Arch Biochem. Biophys. 294, 168–172

    Article  PubMed  CAS  Google Scholar 

  10. Rolland, V., Dugan, L, Le, L. X., and Lavau, M. (1995) Evtdence of increased glyceraldehyde-3-phosphate dehydrogenase and fatty acid synthetase promoter acttvittes in transiently transfected adipocytes from genetically obese rats. J Blol Chem 270, 1102–1106

    CAS  Google Scholar 

  11. Kawaguchi, H., Yavart, R., Stover, M. L., Rowe, D W., Ratsz, L G., and Pilbeam, C. C. (1994) Measurement of interleukin-1 sttmulated constituttve prostaglandm G/H synthase (cyclooxygenase) mRNA levels in osteoblastic MC3T3-El ceils using competttive reverse transcriptase polymerase chain reaction. Endocr Res 20, 219–233

    Article  PubMed  CAS  Google Scholar 

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© 1998 Humana Press Inc.

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N. A. Palmer, C. (1998). Quantification of Cytochrome P450 Gene Expression by RNase Protection Analysis. In: Phillips, I.R., Shephard, E.A. (eds) Cytochrome P450 Protocols. Methods in Molecular Biology™, vol 107. Humana Press. https://doi.org/10.1385/0-89603-519-0:267

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  • DOI: https://doi.org/10.1385/0-89603-519-0:267

  • Publisher Name: Humana Press

  • Print ISBN: 978-0-89603-519-5

  • Online ISBN: 978-1-59259-580-8

  • eBook Packages: Springer Protocols

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