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Synthesis of a One-Bead One-Compound Combinatorial Peptide Library

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Combinatorial Peptide Library Protocols

Part of the book series: Methods in Molecular Biology™ ((MIMB,volume 87))

Abstract

The four general methods to generate and screen a huge combinatorial peptide library (>107 peptides) are: biological libraries such as filamentous phage (1), plasmid (2), or polysome (3) libraries; the “one-bead one-compound” synthetic combinatonal library method or the “Selectlde process” (46); synthetic peptide library methods that require deconvolution, such as an iterative approach (7,8), positional scanning (9); orthogonal partition approach (10), or recurse deconvolution (11); and synthetic library using affinity column selection method (12,13).

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References

  1. Scott J K. and Smith G.P. (1990) Searching for peptide ligands with an epitope library. Science 249, 386–390.

    Article  PubMed  CAS  Google Scholar 

  2. Schatz P. (1993) Use of peptide libraries to map the substrate specificity of a peptide-modifying enzyme A 13 residue consensus peptide specifies biotinylation in Escherichia cob Biotechnology 11, 1138–1143.

    PubMed  CAS  Google Scholar 

  3. Kawasaki G. (1991) Cell-free synthesis and isolation of novel genes and polypeptides. PCT International Patent Application W09l/05058.

    Google Scholar 

  4. Lam K. S., Salmon S. E., Hersh E M., Hruby V. J., Kazmierski W. M., and Knapp R. J. (1991) One-bead, one-peptide: a new type of synthetic peptide library for identifying bgand-binding activity. Nature 354, 82–84

    Article  PubMed  CAS  Google Scholar 

  5. Lebl M., Krchnak V., Sepetov N F., Seligmann B., Strop P., Felder S and Lam K S (1995) One-bead-one structure combinatorial libraries. Bzopolymers 37, 177–198.

    Article  CAS  Google Scholar 

  6. Lam K S., Lebl M., and Krchnak V. (1997) The “ one-bead-one-compound” combinatorial library method. Chem. Rev. 97, 411–448

    Article  PubMed  CAS  Google Scholar 

  7. Geysen H. M., Rodda S J., and Mason T J. (1986) A priori delmeation of a peptide which mimics a discontmuous antigenic determinant. Mol. Immunol. 23, 709–715.

    Article  PubMed  CAS  Google Scholar 

  8. Houghten R. A., et al. (1991) Generation and use of synthetic peptide combinatorial libraries for basic research and drug discovery. Nature 354, 84–86

    Article  PubMed  CAS  Google Scholar 

  9. Dooley C. T and Houghten R A (1993) The use of positional scanning synthetic peptide combinatorial libraries for the rapid determination of opioid receptor ligands Life Sci. 56, 1509–1517

    Article  Google Scholar 

  10. Deprez B., Willard X., Bourel L., Coste H., Hyafil F., and Tartar A (1995) Orthogonal combinatorial chemical libraries J Am. Chem. Sot. 117, 5405–5408

    Article  CAS  Google Scholar 

  11. Erb E., Janda K., and Brenner S. (1994) Recenstve deconvolution of combinatorial chemtcal libraries Proc.Nutl Acad.Scz USA 91, 11,422–11,425

    Article  CAS  Google Scholar 

  12. Zuckermann R. N., Kerr J. M., Slam M A., Banvtlle S. C., and Santa D V (1992) Identification of highest-affinity ligands by affinity selection from equimolar peptide mixtures generated by robotic synthesis. Proc Natl. Acad. Scz. USA 89, 4505–4509.

    Article  CAS  Google Scholar 

  13. Songyang Z., Carraway K L., Eck M. J., Harrtson S C., Feldman R. A., Mohammadi M., Schlessinger J., Hubbard S. R., Smith D P., Eng C., Lorenzo M. J., Ponder B. A J., Mayer B J., and Cantley L. C (1995) Catalytic specificity of protein-tyrosme kmases 1s crmcal for selective stgnalling Nature 373, 536–539

    Article  PubMed  CAS  Google Scholar 

  14. Furka A., Sebestyen F., Asgedom M., and Dtbo G (1991) General method for rapid synthesis of multicomponent peptide mixtures. Int J Peptzde Protein Res 37, 487–493.

    Article  CAS  Google Scholar 

  15. Lam K. S and Lebl M (1994) Selectide technology—bead binding screening Methods 6 372–380

    Article  CAS  Google Scholar 

  16. Lebl M., Krchnak V., Salmon S E., and Lam K. S (1994) Screening of completely random one-bead-one-peptide libraries for activmes in solution Methods 6 381–387.

    Article  CAS  Google Scholar 

  17. Kaiser E., Colescott R. L., Bossinger C D., and Cook P. I. (1970) Color test for detection of free terminal amino groups in the solid-phase synthesis of peptides Anal. Blochem. 34, 595–602.

    Article  CAS  Google Scholar 

  18. King D. S., Fields C G., and Fields G. B. (1990) A cleavage method which minimizes side reactions following Fmoc solid phase peptide synthesis Int. J. Peptlde Protein Res. 36, 255–266.

    Article  CAS  Google Scholar 

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© 1998 Humana Press Inc., Totowa, NJ

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Lam, K.S., Lebl, M. (1998). Synthesis of a One-Bead One-Compound Combinatorial Peptide Library. In: Cabilly, S. (eds) Combinatorial Peptide Library Protocols. Methods in Molecular Biology™, vol 87. Humana Press. https://doi.org/10.1385/0-89603-392-9:1

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  • DOI: https://doi.org/10.1385/0-89603-392-9:1

  • Publisher Name: Humana Press

  • Print ISBN: 978-0-89603-392-4

  • Online ISBN: 978-1-59259-571-6

  • eBook Packages: Springer Protocols

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