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The Effect of Detergents on Proteins Analyzed by Electrospray Ionization

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Protein and Peptide Analysis by Mass Spectrometry

Part of the book series: Methods in Molecular Biology™ ((MIMB,volume 61))

Abstract

Detergents or surfactants are widely used in protein chemistry (13), principally to solubilize and stabilize proteins and to disaggregate protein complexes. Membrane-bound proteins, in particular, frequently require detergent treatment in order to dissolve. Some surfactants disrupt higher order structure, and others are employed as aids in protein refolding. They are also employed in both gel and capillary electrophoresis, and enhance peptide and protein recoveries from synthetic membranes in electroblotting and in electroelution of proteins from gels. Detergents have the reputation of being completely unsuitable for electrospray ionization-mass spectrometry (ESI-MS) of peptides and proteins; the reality is that some, but not all detergents, are unsuitable, and that in cases where one can be flexible in the choice of surfactant, ESI conditions can sometimes be found that will yield a useful mass spectrum (49). It is still wise for mass spectrometrists to avoid detergents whenever possible; they add interfering ions and rarely improve signal-to-noise ratios. On the other hand, it is naive to believe that all biochemical problems can be solved without detergents. We present our studies on detergent effects hoping to provide a useful guide in detergent selection for ESI-MS applications.

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References

  1. Neugebauer, J. (1990) Detergents an overview. Methods Enzymol. 182, 239–282.

    Article  PubMed  CAS  Google Scholar 

  2. Neugebauer, J. (1992) A guide to the properties and uses of detergents in biology and biochemistry. Doc. No. CB0068-0892, Calbiochem-Novabiochem. Corp, LaJolla, CA.

    Google Scholar 

  3. Bollag, D. M. and Edelstein, S. J. (1991) Protein Methods. Wiley-Liss, New York.

    Google Scholar 

  4. Ogorzalek Loo, R. R., Dales, N., and Andrews, P. C. (1994) Surfactant effects on protein structure examined by electrospray ionization mass spectrometry. Protein Sci. 3, 1975–1983.

    Article  Google Scholar 

  5. Barnidge, D. R., Dratz, E., Sunner, J., and Jesaitis, A. J. (1994) Analysis of Hydrophobic Protein Samples Containing Detergents by Electrospray Ionization Mass Spectrometry. Proceedings of the 42nd ASMS Conference on Mass Spectrometry and Allied Topis, Chicago, IL, p. 671.

    Google Scholar 

  6. Kirby, D., Greeve, K. F., Foret, F., Vouros, P., and Karger, B. L. (1994) Capillary Electrophoresis-Electrospray Ionization Mass Spectrometry Utilizing Electrolytes Containing Surfactants. Proceedings of the 42nd ASMS Conference on Mass Spectrometry and Allied Topics, Chicago, IL, p. 1014.

    Google Scholar 

  7. Varghese, J. and Cole, R. B. (1993) Cetyltrimethylammonium chloride as a surfactant buffer additive for reversed-polarity capillary electrophoresis-electrospray mass spectrometry. J. Chromatogr. A 652, 369–376.

    Article  PubMed  CAS  Google Scholar 

  8. Loo, J. A. and Pesch, R. (1994) Sensitive and selective determination of proteins with electrospray ionization magnetic sector mass spectrometry and array detection. Anal. Chem. 66, 3659–3663.

    Article  CAS  Google Scholar 

  9. Loo, J. A. and Ogorzalek Loo, R. R. (1995) Applying charge discrimination with electrospray ionization-mass spectrometry to protein analysis. J. Am. Soc. Mass Spectrom. 6, 1098–1104.

    Article  CAS  Google Scholar 

  10. Allen, M. H. and Vestal, M. L. (1992) Design and performance of a novel electrospray interface. J. Am. Soc. Mass Spectrom. 3, 18–26.

    Article  CAS  Google Scholar 

  11. Andrews, P. C., Allen, M. H., Vestal, M. H., and Nelson, R. W. (1992), Large-scale protein mapping using infrequent cleavage reagents, LD TOF MS, and ESMS, in Techniques in Protein Chemistry III (Angeletti, R. H., ed.), Academic, San Diego, CA, pp. 515–523.

    Google Scholar 

  12. Whitehouse, C. M., Dreyer, R. N., Yamashita, M., and Fenn, J. B. (1985) Electrospray interface for liquid chromatographs and mass spectrometers. Anal. Chem. 57, 675–679.

    Article  PubMed  CAS  Google Scholar 

  13. Chowdhury, S. K., Katta, V., and Chait, B. T. (1990) An electrospray-ionization mass spectrometer with new features. Rapid Commun. Mass Spectrom. 4, 81–87.

    Article  PubMed  CAS  Google Scholar 

  14. Bruins, A. P., Covey, T. R., and Henion, J. D. (1987) Ion spray interface for combined liquid chromatography/atmospheric pressure ionization mass spectrometry. Anal. Chem. 59, 2642–2646.

    Article  CAS  Google Scholar 

  15. Covey, T. R., Bonner, R. F., Shushan, B. I., and Henion, J. D. (1988) The determination of protein, oligonucleotide and peptide molecular weights by ion-spray mass spectrometry. Rapid Commun. Mass Spectrom. 2, 249–256.

    Article  PubMed  CAS  Google Scholar 

  16. Smith, R. D., Loo, J. A., Edmonds, C. G., Barmaga, C. J., and Udseth, H. R. (1990) New developments in biochemical mass spectrometry electrospray ionization. Anal. Chem. 62, 882–899.

    Article  PubMed  CAS  Google Scholar 

  17. Ikonomou, M. G., Blades, A. T., and Kebarle, P. J. (1991) Electrospray mass spectrometry of methanol and water solutions suppression of electric discharge with SF6 gas. J. Am. Soc. Mass Spectrom. 2, 497–503.

    Article  CAS  Google Scholar 

  18. Ikonomou, M. G., Blades, A. T., and Kebarle, P. (1990) Investigations of the electrospray interface for liquid chromatography/mass spectrometry. Anal. Chem. 62, 957–967.

    Article  CAS  Google Scholar 

  19. Kay, I. and Mallet, A. I. (1993) Use of an on-line liquid chromatography trapping column for the purification of protein samples prior to electrospray mass spectrometric analysis. Rapid Commun. Mass Spectrom. 7, 744–746.

    Article  CAS  Google Scholar 

  20. Katta, V. and Chait, B. T. (1991) Observation of the heme-globin complex in native myoglobin by electrospray-ionization mass spectrometry. J. Am. Chem. Soc. 113, 8534,8535.

    Article  CAS  Google Scholar 

  21. Loo, J. A., Giordani, A. B., and Muenster, H. (1993) Observation of Intact (heme-bound) myoglobin by electrospray ionization on a double-focusing mass spectrometer. Rapid Commun. Mass Spectrom. 7, 186–189.

    Article  CAS  Google Scholar 

  22. Light-Wahl, K. J., Winger, B. E., and Smith, R. D. (1993) Observation of the multimeric forms of concanavalin-A by electrospray ionization mass spectrometry. J. Am. Chem. Soc. 115, 5869,5870.

    Article  CAS  Google Scholar 

  23. Loo, J. A., Ogorzalek Loo, R. R., and Andrews, P. C. (1993) Primary to quaternary protein structure determination with electrospray ionization and magnetic sector mass spectrometry. Org. Mass Spectrom. 28, 1640–1649.

    Article  CAS  Google Scholar 

  24. Mirza, U. A. and Chait, B. T. (1994) Effects of anions on the positive ion electrospray ionization mass spectra of peptides and proteins. Anal. Chem. 66, 2898–2904.

    Article  PubMed  CAS  Google Scholar 

  25. Matsubara, N. and Terabe, S (1992) Separation of closely related peptides by capillary electrophoresis with a nonionic surfactant. Chromatographia 34, 493–496.

    Article  CAS  Google Scholar 

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© 1996 Humana Press Inc., Totowa, NJ

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Ogorzalek Loo, R.R., Dales, N., Andrews, P.C. (1996). The Effect of Detergents on Proteins Analyzed by Electrospray Ionization. In: Chapman, J.R. (eds) Protein and Peptide Analysis by Mass Spectrometry. Methods in Molecular Biology™, vol 61. Humana Press. https://doi.org/10.1385/0-89603-345-7:141

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  • DOI: https://doi.org/10.1385/0-89603-345-7:141

  • Publisher Name: Humana Press

  • Print ISBN: 978-0-89603-345-0

  • Online ISBN: 978-1-59259-547-1

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