Abstract
The introduction of yeast artificial chromosomes (YACs) as cloning vectors in 1987 has significantly advanced the analysis of complex genomes (1). The capability of cloning large DNA (100–2000 kb) as YACs has accelerated the construction of physical maps and contig building (a contiguous set of overlapping clones). YAC contigs now cover entire human chromosomes (i.e., Y and 21) (2,3) and small genomes (i.e., Schizosaccharomyces pombe) (4), and large YAC contigs cover much of the human genome (5). The main advantages of YACs over prokaryotic-based cloning systems are their large insert capacity and ability to maintain sequences that are unstable or not well represented in bacteriophage or cosmid genomic libraries (6). Therefore, YACs complement existing cloning vectors (cosmids, bacteriophage) and new cloning vectors (P1 bacteriophage [P1], bacterial artificial chromosomes [BACs], and P1-derived artificial chromosomes [PACs]; for review, see ref. 7) in mapping and chromosome walking projects (6, 8).
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Burke, D. T., Carle, G. F., and Olson, M. V. (1987) Cloning of large DNA segments of exogenous DNA into yeast by means of artificial chromosome vectors Science 236, 806–812.
Foote, S., Vollrath, D., Hilton, A., and Page, D. C. (1992) The human Y chromosome overlapping DNA clones spanning the euchromatic region Science 258, 60–66.
Chumakov, I., Rigault, P., Guillou, S., Ougen, P., Billaut, A., Guasconi, G., et al (1992) Continuum of overlapping clones spanning the entire human chromosome 21q. Nature 359, 380–387.
Maier, E., Howeisel, J., McCarthy, L., Mott, R., Grigoriev, A. P., Monaco, A. P., Larin, Z., and Lehrach, H. (1992) Complete coverage of the Schizosaccharomyces pombe genome in yeast artificial chromosomes. Nature Genet. 1, 273–297.
Cohen, D., Chumakov, I., and Weissenbach, J. (1993) A first-generation physical map of the human genome. Nature 366, 698–701.
Coulson, A., Waterston, R., Kiff, J., Sulston, J., and Kohara, Y. (1988) Genome linking with yeast artificial chromosomes Nature 335, 184–186.
Monaco, A. P. and Larin, Z. (1994) YACs, BACs, PACs and MACs artificial chromosomes as research tools Trends Biotechnol. 12, 280–286.
Garza, D., Ajioka, J. W., Burke, D. T., and Hartl, D. L. (1989) Mapping the Drosophila genome with yeast artificial chromosomes. Science 246, 641–646.
Guzman, P. and Ecker, J. (1988) Development of large DNA methods for plants, molecular cloning of large segments of Arabidopsis and carrot DNA into yeast. Nucleic Acids Res. 16, 11,091–11,105.
Larin, Z., Monaco, A. P., and Lehrach, H. (1991) Yeast artificial chromosome libraries containing large inserts from mouse and human DNA. Proc. Natl. Acad. Sci. USA 88, 4123–4127.
Burke, D. T., Rossi, J. M., Leung, J., Koos, D. S., and Tilghman, S. M. (1991) A mouse genomic library of yeast artificial chromosome clones Mammal Genome 1, 65.
Anand, R., Villasante, A., and Tyler-Smith, C. (1989) Construction of yeast artificial chromosome libraries with large inserts using fractionation by pulsed-field gel electrophoresis. Nucleic Acids Res. 17, 3425–3433.
Albertsen, H. M., Abderrahim, H., Cann, H. C., Dausset, J., Le Paslier, D., and Cohen, D. (1990) Construction and characterization of a yeast artificial chromosome library containing seven haploid human genome equivalents Proc. Natl. Acad. Sci. USA 87, 5109–5113.
Reeves, R. H., Pavan, W. J., and Hieter, P. (1992) Yeast artificial chromosome modification and manipulation, in Methods in Enzymology, vol. 216 (Wu, R., ed.), Humana, Totowa, NJ, pp. 584–603.
Chartier, F. L., Keer, J. T., Sutcliffe, M. J., Henriques, D. A., Mileham, P., and Brown, S. D. M. (1992) Construction of a mouse yeast artificial chromosome library in a recombinant-deficient strain. Nature Genet 1, 132–136.
Neil, D. L., Villasante, A., Fisher, R. B., Vetrie, D., Cox, B., and Tyler-Smtth, C. (1990) Complete coverage of the Schizosaccharomyces pombe genome in yeast artificial chromosomes. Nucleic Acids Res. 18, 421–428.
Ling, L. L., Ma, N. S-F., Smith, D. R., Miller, D. D., and Moir, D. T. (1993) Reduced occurrence of chimeric YACs in recombinant deficient hosts. Nucleic Acids Res. 21, 6045,6046.
Smith, D. R., Smyth, A. P., and Moir, D. T. (1992) Copy number amplification of yeast artificial chromosomes, in Methods in Enzymology, vol 216 (Wu, R., ed.), Humana, Totowa, NJ, pp 603–614.
McCormick, M. K., Shero, J. H., Cheung, M. C., Kan, Y. W., Hieter, P A., and Antonarakis, S. E. (1989) Construction of human chromosome 21-specific yeast artificial chromosomes Proc. Natl. Acad. Sci. USA 86, 9991–9995.
Lee, J. T., Murgia, A., Sosnoski, D. M., Olivos, I. M., and Nussbaum, R. L. (1992) Construction and characterisation of a yeast artificial chromosome library for Xpter-Xq27. 3: a systematic determination of cocloning rate and X-chromosome representation. Genomics 12, 526–533.
Maniatis, T., Fritsch, E. F., and Sambrook, J. (1982) Molecular Cloning. A Laboratory Manual, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
Herrmann, B. G., Barlow, D. P., and Lehrach, H. (1987) An inverted duplication of more than 650 Kbp in mouse chromosome 17 mediates unequal but homologous recombination between chromosomes heterozygous for a large inversion. Cell 48, 813–825.
Rothstein, R. (1985) Cloning in yeast, in DNA Cloning Volume II (Glover, D. M., ed.), IRL Press, Oxford, UK, pp. 45–65.
Burgers, P. M. J. and Percival, K. J. (1987) Transformation of yeast spheroplasts without cell fusion. Anal. Biochem. 163, 391–397.
Hieter, P., Mann, C., Snyder, M., and Davis, R. W. (1985) Mitotic stability of yeast chromosomes: a colony color assay that measures nondisjunction and chromosome loss. Cell 40, 381–392.
Green, E. D. and Olson, M. V. (1990) Systematic screening of yeast artificial chromosome libraries by use of the polymerase chain reaction Proc. Natl. Acad. Sci. USA 87, 1213–1217.
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© 1996 Humana Press Inc.
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Larin, Z., Monaco, A.P., Lehrach, H. (1996). Generation of Large Insert YAC Libraries. In: Markie, D. (eds) YAC Protocols. Methods in Molecular Biology™, vol 54. Humana Press. https://doi.org/10.1385/0-89603-313-9:1
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DOI: https://doi.org/10.1385/0-89603-313-9:1
Publisher Name: Humana Press
Print ISBN: 978-0-89603-313-9
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