Skip to main content

Crystallization of Membrane Proteins for X-Ray Analysis

  • Protocol
Book cover Biomembrane Protocols

Part of the book series: Methods in Molecular Biology ((MIMB,volume 27))

  • 728 Accesses

Abstract

In order to determine the structure of a protein by X-ray crystallography, well ordered three-dimensional crystals are required. However, despite the wealth of experience accumulated in the course of the crystallization and structural analyses of several hundred soluble globular proteins and their complexes, the process of crystallization still remains something of an art, and is often the rate limiting step of any analysis. For membrane proteins that present an additional challenge by virtue of their amphipathic nature, experience is considerably more limited, and the first three-dimensional crystals suitable for X-ray analysis were only reported in 1980 (1,2). Many membrane proteins form two-dimensional arrays in situ, and these may be studied by electron microscopy and electron diffraction of tilted specimens to determine their three-dimensional structure, but only in the pioneering study of bacteriorhodopsin has the resolution of the structural analysis approached that obtainable by X-ray crystallography (3). The formation of two-dimensional crystalline arrays will not be considered in this chapter. The first membrane protein crystal structure, the bacterial photosynthetic reaction center complex, was solved in 1985 (4); this was followed by the second reaction center structure in 1986 (5,6), and more recently porin in 1991 (7). Since these pioneering studies, increasing numbers of membrane protein crystallizations have been reported. For recent reviews, see refs. 811.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Michel, H. and Oesterhelt, D. (1980) Three-dimensional crystals of membrane proteins: Bacteriorhodopsin. Proc Natl. Acad. Sci USA 77, 1283–1285.

    Article  PubMed  CAS  Google Scholar 

  2. Garavito, R. M. and Rosenbusch, J P. (1980) Three-dimensional crystals of an integral membrane protein. J Cell Biol. 86, 327–329.

    Article  PubMed  CAS  Google Scholar 

  3. Henderson, R., Baldwin, J. M., Ceska, T. A., Zemlin, F., Beckmann, E, and Downing, K. H. (1990) Model for the structure of bacteriorhodopsin based upon high-resolution electron cryo-microscopy. J Mol Biol 213, 899–929

    Article  PubMed  CAS  Google Scholar 

  4. Deisenhofer, J., Epp, O., Miki, K., Huber, R., and Michel, H. (1985) Structure of the protein subunits in the photosynthetic reaction centre of Rhodopseudo-monas viridis at 3 Å resolution. Nature 318, 618–624

    Article  Google Scholar 

  5. Chang, C.-H, Tiede, D., Tang, J., Smith, U., Norris, J., and Schiffer, M. (1986) Structure of Rhodopseudomonas sphaeroides R-26 reaction centre. FEBS Lett 205, 82–86.

    Article  PubMed  CAS  Google Scholar 

  6. Allen, J. P., Feher, G., Yeates, T. O., Rees, D. C, Deisenhoffer, J., Michel, H., and Huber, R. (1986) Structural homology of reaction centres from Rhodopseudomonas sphaeroides and Rhodopseudomonas viridis as determined by X-ray diffraction. Proc. Natl Acad. Sci. USA 83, 8589–8593.

    Article  PubMed  CAS  Google Scholar 

  7. Weiss, M. S., Kreusch, A., Schiltz, E., Nestel, U., Welte, W., Weckesser, J., and Schulz, G E. (1991) The structure of porin from Rhodobacter capsulatus at 1.8 Å resolution. FEBS Lett 280, 379–382.

    Article  PubMed  CAS  Google Scholar 

  8. Michel, H. (1983) Crystallisation of membrane proteins. Trends Biochem. Sci. 8, 56–59.

    Article  CAS  Google Scholar 

  9. Garavito, R. M., Marcovic-Hously, Z., and Jenkins, J. (1986) The growth and characterisation of membrane protein crystals. J. Crystal Growth 76, 701–709.

    Article  CAS  Google Scholar 

  10. Kühlbrandt, W. (1988) Three-dimensional crystallisation of membrane proteins. Q. Rev. Biophys 21, 429–477.

    Article  PubMed  Google Scholar 

  11. Michel, H. (1991) Crystallisation of Membrane Proteins CRC, Boca Raton, FL

    Google Scholar 

  12. Pauptit, R. A., Schirmer, T., Jansonius, J. N., Rosenbusch, J. P., Parker, M. W., Tucker, A. D, Tsernoglou, D., Weiss, M S., and Schulz, G. E. (1991) A common channel-forming motif in evolutionarily distant porins. J. Struct. Biol. 107, 136–145.

    Article  PubMed  CAS  Google Scholar 

  13. Timmins, P. A, Hauk, J., Wacker, T., and Welte, W. (1991) The influence of heptane-1,2,3-triol on the size and shape of LDAO micelles. Implications for the crystallisation of membrane proteins. FEBS Lett. 280, 115–120.

    Article  PubMed  CAS  Google Scholar 

  14. McPherson, A. (1990) Current approaches to macromolecular crystallisation. Eur J Biochem. 189, 1–23

    Article  PubMed  CAS  Google Scholar 

  15. McPherson, A. (1982) Preparation and Analysis of Protein Crystals. Wiley, New York.

    Google Scholar 

  16. Wyckoff, H. W., Hirs, C. H. W., and Timasheff, S. N. (eds.) (1985) Section II: Crystallisation and treatment of crystals, in Methods in Enzymology, vol. 114, Part A, Academic, London

    Google Scholar 

  17. Michel, H (1982) Three-dimensional crystals of a membrane protein complex. The photosynthetic reaction centre from Rhodopseudomonas viridis. J. Mol. Biol. 158, 567–572

    Article  PubMed  CAS  Google Scholar 

  18. Chang, C-H., Schiffer, M., Tiede, D., Smith, U., and Norris, J (1985) Characterisation of bacterial photosynthetic reaction centre crystals from Rhodopseudomonas sphaeroides R-26 by X-ray diffraction. J. Mol. Biol 186, 201–203.

    Article  PubMed  CAS  Google Scholar 

  19. Frank, H A, Taremi, S S.,and Knox, J. R. (1987) Crystallisation and preliminary X-ray and optical spectroscopic characterisation of the photochemical reaction centre from Rhodobacter sphaeroides strain 2 4.1. J. Mol. Biol. 198, 139–141

    Article  PubMed  CAS  Google Scholar 

  20. Welte, W., Wacker, T., Leis, M., Kreutz, W., Shiozawa, J., Gad’on, N., and Drews, G. (1985) Crystallisation of the photosynthetic light-harvesting pigment-protein complex B800-850 of Rhodopseudomonas capsulata. FEBS Lett. 182, 260–264.

    Article  CAS  Google Scholar 

  21. Kuhlbrandt, W. (1987) Three-dimensional crystals of the light-harvesting chlorophyll a/b protein complex from pea chloroplasts. J. Mol. Biol. 194, 757–762.

    Article  PubMed  CAS  Google Scholar 

  22. Garavito, R. M, Jenkins, J, Jansonius, J N, Karlsson, R, and Rosenbusch, J. P. (1983) X-ray diffraction analysis of matrix porin, an integral membrane protein from Escherichia coli outer membranes J. Mol. Biol 164, 313–327.

    Article  PubMed  CAS  Google Scholar 

  23. Kreusch, A, Weiss, M. S., Welte, W, Weckesser, J., and Schulz, G. E. (1991) Crystals of an integral membrane protein diffracting to 1.8 A resolution. J. Mol Biol 217, 9–10.

    Article  PubMed  CAS  Google Scholar 

  24. Garavito, R. M., Hinz, U., and Neuhaus, J.-M. (1984) The crystallisation of outer membrane proteins from Escherichia coli. Studies on lamB and ompA gene products. J. Biol. Chem. 259, 4254–4257.

    PubMed  CAS  Google Scholar 

  25. Stauffer, K. A., Page, M G. P., Hardmeyer, A., Keller, T A, and Pauptit, R A. (1990) Crystallisation and preliminary X-ray characterisation of maltoporin from Escherichia coli J Mol. Biol. 211, 297–299.

    Article  PubMed  CAS  Google Scholar 

  26. Tucker, A. D., Jackman, S., Parker, M. W., and Tsernoglou, D (1991) Crystallisation and preliminary X-ray analysis of phosphoporin from the outer membrane of Escherichia coli. J. Mol. Biol. 222, 881–884.

    Article  PubMed  CAS  Google Scholar 

  27. Pauptit, R. A., Zhang, H., Rummel, G., Schirmer, T., Jansonius, J N., and Rosenbusch, J. P. (1991) Trigonal crystals of porin from Escherichia coli. J. Mol Biol. 218, 505–507.

    Article  PubMed  CAS  Google Scholar 

  28. Gros, P., Groendijk, H, Drenth, J., and Hoi, W. G J. (1988) Experiments in membrane protein crystallisation. J. Crystal Growth 90, 193–200.

    Article  CAS  Google Scholar 

  29. Yoshikawa, S., Tera, T., Takahashi, Y., Tsukihara, T, and Caughey, W. S. (1988) Crystalline cytochrome c oxidase of bovine heart mitochondrial membrane: Composition and X-ray diffraction studies. Proc. Natl Acad Sci. USA 85, 1354–1358.

    Article  PubMed  CAS  Google Scholar 

  30. Stokes, D. L, and Green, N. M. (1990) Three-dimensional crystals of CaATPase from sarcoplasmic reticulum: Symmetry and molecular packing. Biophys J. 57, 1–14

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

Copyright information

© 1994 Humana Press Inc. Totowa, NJ

About this protocol

Cite this protocol

Sutton, B.J., Sohi, M.K. (1994). Crystallization of Membrane Proteins for X-Ray Analysis. In: Biomembrane Protocols. Methods in Molecular Biology, vol 27. Springer, Totowa, NJ. https://doi.org/10.1385/0-89603-250-7:1

Download citation

  • DOI: https://doi.org/10.1385/0-89603-250-7:1

  • Publisher Name: Springer, Totowa, NJ

  • Print ISBN: 978-0-89603-250-7

  • Online ISBN: 978-1-59259-514-3

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics