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In Vitro Recombination and Mutagenesis of DNA

SOEing Together Tailor-Made Genes

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PCR Protocols

Part of the book series: Methods in Molecular Biology ((MIMB,volume 15))

Abstract

Gene Splicing by Overlap Extension (gene SOEing) provides a powerful method of recombining sequences without depending on restriction sites or ligase, and a simple, generally applicable way of using polymerase chain reaction (PCR) to perform site-directed mutagenesis in vitro. This technique allows even those with minimal molecular biology expertise to generate quickly genetic constructs that might otherwise have been impractical using only the older (restriction enzymebased) technology.

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References

  1. Mullis, K. B. and Faloona, F. A. (1987) Specific synthesis of DNA in vitro via a polymerase-catalysed chain reaction. Methods Enzymol. 155, 335–350.

    Article  PubMed  CAS  Google Scholar 

  2. Mullis, K., Faloona, F., Scharf, S., Saiki, R., Horn, G., and Erlich, H. (1986) Specific enzymatic amplification of DNA in vitro: the polymerase chain reaction. Cold Spring Harbor Symp. Quant. Biol. 51, 263–273.

    Article  PubMed  CAS  Google Scholar 

  3. Kadowaki, H., Kadowaki, T., Wondisford, F. E., and Taylor, S. I. (1989) Use of polymerase chain reaction catalysed by Taq DNA polymerase for site-specific mutagenesis. Gene 76, 161–166.

    Article  PubMed  CAS  Google Scholar 

  4. Vallette, F., Mege, E., Reiss, A., and Milton, A. (1989) Constuction of mutant and chimeric genes using the polymerase chain reaction. Nucleic Acids Res. 17, 723–733.

    Article  PubMed  CAS  Google Scholar 

  5. Higuchi, R., Krummel, B., and Saiki, R.K. (1988) A general method of in vitro preparation and specific mutagenesis of DNA fragments: study of protein and DNA interactions. Nucleic Acids Res. 16, 7351–7367.

    Article  PubMed  CAS  Google Scholar 

  6. Ho, S. N., Hunt, H. D., Horton, R. M., Pullen, J. K., and Pease, L. R. (1989) Site-directed mutagenesis by overlap extension using the polymerase chain reaction. Gene 77, 51–59.

    Article  PubMed  CAS  Google Scholar 

  7. Horton, R. M., Hunt, H. D., Ho, S. N., Pullen, J. K., and Pease, L. R. (1989) Engineering hybrid genes without the use of restriction enzymes: gene splicing by overlap extension. Gene 77, 61–68.

    Article  PubMed  CAS  Google Scholar 

  8. Horton, R. M., Cai, Z., Ho, S. N., and Pease, L. R. (1990) Gene splicing by overlap extension: Tailor-made genes using the polymerase chain reaction. BioTechniques 8, 528–535.

    PubMed  CAS  Google Scholar 

  9. Kain, K. C., Orlandi, P. A., and Lanar, D. E. (1991) Universal promoter for gene expression without cloning: expression-PCR. BioTechniques 10, 366.

    PubMed  CAS  Google Scholar 

  10. Davis, G. T., Bedzyk, W. D. Voss, E. W., and Jacobs, T. W. (1991) Single Chain Antibody (SCA) encoding genes: one-step construction and expression in eukaryotic cells. Biotechnology 9, 165–169.

    Article  PubMed  CAS  Google Scholar 

  11. Daughtery, B. L., DeMartino, J. A., Law, M.-F., Kawka, D. W., Singer, I. I., and Mark, G. E. (1991) Polymerase chain reaction facilitates the cloning, CDR-grafting, and rapid expression of a murine monoclonal antibody directed against the CD18 component of leukocyte integrins. Nucleic Acids Res. 19, 2471–2476.

    Article  Google Scholar 

  12. Suggs, S.V., Hirose, T., Miyake, T., Kawashima, E. H., Johnson, M. J., Itakura, K., and Wallace, R. B. (1981) Use of synthetic oligo-deoxyribonucleotides for the isolation of cloned DNA sequences, in Developmental Biology Using Purified Genes (Brown, D. D. and Fow, C. F., eds.), Academic, New York, pp. 683–693.

    Google Scholar 

  13. Yon, J. and Fried, M. (1989) Precise gene fusion by PCR. Nucleic Acids Res. 17, 4895.

    Article  PubMed  CAS  Google Scholar 

  14. Sarkar, G. and Sommer, S. S. (1990) The “megaprimer” method of site-directed mutagenesis. BioTechniques 8, 404–407.

    PubMed  CAS  Google Scholar 

  15. Horton, R. M. and Pease, L. R. (1991) Recombination and mutagenesis of DNA sequences using PCR, in Directed Mutagenesis: A Practical Approach. (McPherson, M. J., ed.) IRL, Oxford, pp. 217–247.

    Google Scholar 

  16. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual (2nd ed.) Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.

    Google Scholar 

  17. Yolov, A. A. and Shaborova, Z. A. (1990) Constructing DNA by polymerase recombination. Nucleic Acids Res. 18, 3983–3986.

    Article  PubMed  CAS  Google Scholar 

  18. Eckert, K. A. and Kunkel, T. A. (1990) High fidelity DNA synthesis by the Thermus aquaticus DNA polymerase. Nucleic Acids Res. 18, 3739–3744.

    Article  PubMed  CAS  Google Scholar 

  19. Hanes, S. D. and Brent, R. (1991) A genetic model for interaction of the homeodomain recognition helix with DNA. Science 251, 426–430.

    Article  PubMed  CAS  Google Scholar 

  20. Rudert, R. A. and Trucco, M. (1990) DNA polymers of protein binding sequences generated by PCR. Nucleic Acids Res. 18, 6460.

    Article  PubMed  CAS  Google Scholar 

  21. Shuldiner, A. R., Scott, L. A., and Roth, J. (1990) PCR-induced (ligase-free) subcloning: a rapid reliable method to subclone polymerase chain reaction (PCR) products. Nucleic Acids Res. 18, 1920.

    Article  PubMed  CAS  Google Scholar 

  22. Jones, D. H. and Howard, B. H. (1990) A rapid method for site-specific mutagenesis and directional subcloning by using the polymerase chain reaction to generate recombinant circles. BioTechniques 8, 178–183.

    Article  PubMed  CAS  Google Scholar 

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© 1993 Humana Press Inc., Totowa, NJ

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Horton, R.M. (1993). In Vitro Recombination and Mutagenesis of DNA. In: White, B.A. (eds) PCR Protocols. Methods in Molecular Biology, vol 15. Humana Press, Totowa, NJ. https://doi.org/10.1385/0-89603-244-2:251

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  • DOI: https://doi.org/10.1385/0-89603-244-2:251

  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-0-89603-244-6

  • Online ISBN: 978-1-59259-502-0

  • eBook Packages: Springer Protocols

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