Skip to main content

GISH: Resolving Interspecific and Intergeneric Hybrids

  • Protocol
  • First Online:
Molecular Plant Taxonomy

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1115))

Abstract

Genomic in situ hybridization (GISH) is an invaluable cytogenetic technique which enables the visualization of whole genomes in hybrids and polyploidy taxa. Total genomic DNA from one or two different species/genome is used as a probe, labeled with a fluorochrome and directly detected on mitotic chromosomes from root-tip meristems. In sugarcane we were able to characterize interspecific hybrids of two closely related species as well as intergeneric hybrids of two closely related genera.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 89.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 119.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Le HT, Armstrong KC, Miki B (1989) Detection of rye DNA in wheat-rye hybrids and wheat translocation stocks using total genomic DNA as a probe. Plant Mol Bio Rep 7:150–158

    Article  Google Scholar 

  2. Schwarzacher T, Leitch AR, Heslop-Harrison JS (1989) In situ localization of parental genomes in a wide hybrids. Ann Bot 64: 315–324

    Google Scholar 

  3. Jiang J, Gill BS (1994) Different species-specific chromosome translocations in Triticum timopheevii and T. turgidum support the diphyletic origin of polyploid wheats. Chromosome Res 2(1):59–64

    Article  CAS  PubMed  Google Scholar 

  4. Jiang J, Gill BS (2006) Current status and the future of fluorescence in situ hybridization (FISH) in plant genome research. Genome 49:1057–1068

    Article  CAS  PubMed  Google Scholar 

  5. Sreenivasan TV, Ahloowalia BS, Heinz DJ (1987) Cytogenetics. In: Heinz DJ (ed) Sugarcane improvement through breeding. Elsevier, New York, pp 211–253

    Chapter  Google Scholar 

  6. D’Hont A, Ison D, Alix K, Roux C, Glaszmann J-C (1998) Determination of basic chromosome number in the genus Saccharum by physical mapping of ribosomal RNA genes. Genome 41:221–225

    Article  Google Scholar 

  7. Piperidis N, Chen JW, Deng HH, Wang LP, Jackson P, Piperidis G (2010) GISH characterization of Erianthus arundinaceus chromosomes in three generations of sugarcane intergeneric hybrids. Genome 53:331–336

    Article  CAS  PubMed  Google Scholar 

  8. Piperidis G, Piperidis N, D’Hont A (2010) Molecular cytogenetic investigation of chromosome composition and transmission in sugarcane. Mol Gen Genomics 284:65–73. doi:10.1007/s00438-010-0546-3

    Article  CAS  Google Scholar 

  9. Irvine JE (1999) Saccharum species as horticultural classes. Theor Appl Genet 98:186–194

    Article  Google Scholar 

  10. Zhang P, Friebe B (2009) FISH on plant chromosomes. In: Liehr T (ed.) Fluorescence in situ hybridization (FISH)—application guide. Springer Protocol VI, pp 365–394, doi: 10.1007/978-3-540-70581-9_32

Download references

Acknowledgements

This work was financially supported by BSES Ltd and also previously by the Australian Centre for International Agricultural Research and the Co-operative Research Centre for Sugar Industry Innovation through Biotechnology.

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2014 Springer New York

About this protocol

Cite this protocol

Piperidis, N. (2014). GISH: Resolving Interspecific and Intergeneric Hybrids. In: Besse, P. (eds) Molecular Plant Taxonomy. Methods in Molecular Biology, vol 1115. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-62703-767-9_16

Download citation

  • DOI: https://doi.org/10.1007/978-1-62703-767-9_16

  • Published:

  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-1-62703-766-2

  • Online ISBN: 978-1-62703-767-9

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics