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Determination of HIV-1 Co-receptor Usage

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Human Retroviruses

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1087))

Abstract

Human immunodeficiency virus type I (HIV-1) infects target cells through interaction with the CD4 molecule and chemokine receptors, mainly the β-chemokine receptor 5 (CCR5) and the α-chemokine receptor 4 (CXCR4). Viral isolates can be phenotypically classified based on the co-receptor they utilize to infect target cells. In this chapter, methods to determine the co-receptor usage of HIV-1 variants are described.

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References

  1. Asjo B, Morfeldt-Manson L, Albert J, Biberfeld G, Karlsson A, Lidman K, Fenyo EM (1986) Replicative capacity of human immunodeficiency virus from patients with varying severity of HIV infection. Lancet 2:660–662

    CAS  PubMed  Google Scholar 

  2. Gartner S, Markovits P, Markovitz DM, Kaplan MH, Gallo RC, Popovic M (1986) The role of mononuclear phagocytes in HTLV-III/LAV infection. Science 233:215–219

    Article  CAS  PubMed  Google Scholar 

  3. Tersmette M, de Goede RE, Al BJ, Winkel IN, Gruters RA, Cuypers HT, Huisman HG, Miedema F (1988) Differential syncytium-inducing capacity of human immunodeficiency virus isolates: frequent detection of syncytium-inducing isolates in patients with acquired immunodeficiency syndrome (AIDS) and AIDS-related complex. J Virol 62:2026–2032

    PubMed Central  CAS  PubMed  Google Scholar 

  4. Berger EA, Doms RW, Fenyo EM, Korber BT, Littman DR, Moore JP, Sattentau QJ, Schuitemaker H, Sodroski J, Weiss RA (1998) A new classification for HIV-1. Nature 391:240

    Article  CAS  PubMed  Google Scholar 

  5. Cavarelli M, Karlsson I, Zanchetta M, Antonsson L, Plebani A, Giaquinto C, Fenyo EM, De Rossi A, Scarlatti G (2008) HIV-1 with multiple CCR5/CXCR4 chimeric receptor use is predictive of immunological failure in infected children. PLoS One 3:e3292

    Article  PubMed Central  PubMed  Google Scholar 

  6. Karlsson I, Antonsson L, Shi Y, Oberg M, Karlsson A, Albert J, Olde B, Owman C, Jansson M, Fenyo EM (2004) Coevolution of RANTES sensitivity and mode of CCR5 receptor use by human immunodeficiency virus type 1 of the R5 phenotype. J Virol 78: 11807–11815

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  7. Vodros D, Fenyo EM (2005) Quantitative evaluation of HIV and SIV co-receptor use with GHOST(3) cell assay. Methods Mol Biol 304:333–342

    PubMed  Google Scholar 

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Cavarelli, M., Scarlatti, G. (2014). Determination of HIV-1 Co-receptor Usage. In: Vicenzi, E., Poli, G. (eds) Human Retroviruses. Methods in Molecular Biology, vol 1087. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-62703-670-2_16

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  • DOI: https://doi.org/10.1007/978-1-62703-670-2_16

  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-1-62703-669-6

  • Online ISBN: 978-1-62703-670-2

  • eBook Packages: Springer Protocols

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