Skip to main content

Pulsed-Field Gel Electrophoresis Typing of Staphylococcus aureus Isolates

  • Protocol
  • First Online:

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1085))

Abstract

Pulsed-field gel electrophoresis (PFGE) is the most applied and effective genetic typing method for epidemiological studies and investigation of foodborne outbreaks caused by different pathogens, including Staphylococcus aureus. The technique relies on analysis of large DNA fragments generated by the cleavage of intact bacterial chromosomes with a rare cutting restriction enzyme, subsequently resolved by pulsed-field electrophoresis with periodic changes of the orientation of the electrical field across the gel. The high discriminatory power, improved reproducibility due to standardization of experimental protocols and data interpretation guidelines, and establishment of a national PFGE database of S. aureus profiles have made it a valuable means for global tracking of S. aureus infection sources and determination of genetic relatedness of outbreak isolates.

This is a preview of subscription content, log in via an institution.

Buying options

Protocol
USD   49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   89.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD   119.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD   169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

Springer Nature is developing a new tool to find and evaluate Protocols. Learn more

References

  1. Jarvis WR, Jarvis AA, Chinn RY (2012) National prevalence of methicillin-resistant Staphylococcus aureus in inpatients at United States health care facilities. Am J Infect Control 40:194–200

    Article  PubMed  Google Scholar 

  2. Stemper ME, Shukla SK, Reed KD (2004) Emergence and spread of community-associated methicillin-resistant Staphylococcus aureus in rural Wisconsin, 1989-1999. J Clin Microbiol 42:5673–5680

    Article  PubMed  Google Scholar 

  3. Trindade PA, McCulloch JA, Oliveira GA et al (2003) Molecular techniques for MRSA typing: current issues and perspectives. Braz J Infect Dis 7:32–43

    Article  PubMed  CAS  Google Scholar 

  4. Enright MC, Day N, Davies CE et al (2000) Multilocus sequence typing for characterization of methicillin-resistant and methicillin-susceptible clones of Staphylococcus aureus. J Clin Microbiol 38:1008–1015

    PubMed  CAS  Google Scholar 

  5. Koreen L, Ramaswamy SV, Graviss EA et al (2004) spa typing method for discriminating among Staphylococcus aureus isolates: implications for use of a single marker to detect genetic micro- and macrovariation. J Clin Microbiol 42:792–799

    Article  PubMed  CAS  Google Scholar 

  6. Mwangi MM, Wu SW, Zhou YJ et al (2007) Tracking the in vivo evolution of multidrug resistance in Staphylococcus aureus by whole-genome sequencing. Proc Natl Acad Sci 104:9451–9456

    Article  PubMed  CAS  Google Scholar 

  7. Bannerman TL, Hancock GA, Tenover FC et al (1995) Pulsed-field gel electrophoresis as a replacement for bacteriophage typing of Staphylococcus aureus. J Clin Microbiol 33:551–555

    PubMed  CAS  Google Scholar 

  8. McDougal LK, Steward CD, Killgore GE et al (2003) Pulsed-field gel electrophoresis typing of oxacillin resistant Staphylococcus aureus isolates from the United States: establishing a national database. J Clin Microbiol 41:5113–5120

    Article  PubMed  CAS  Google Scholar 

  9. Goering RV, Winters MA (1992) Rapid method for the epidemiological evaluation of gram-positive cocci by field inversion gel electrophoresis. J Clin Microbiol 30:577–580

    PubMed  CAS  Google Scholar 

  10. Swaminathan B, Barrett TJ, Hunter SB et al (2001) PulseNet: the molecular subtyping network for foodborne bacterial disease surveillance, United States. Emerg Infect Dis 7:382–389

    PubMed  CAS  Google Scholar 

  11. Schwartz DC, Cantor CR (1984) Separation of yeast chromosome-sized DNAs by pulsed field gradient gel electrophoresis. Cell 37:67–75

    Article  PubMed  CAS  Google Scholar 

  12. Matushek MG, Bonten MJ, Hayden MK (1996) Rapid preparation of bacterial DNA for pulsed-field gel electrophoresis. J Clin Microbiol 10:2598–2600

    Google Scholar 

  13. Reed KD, Stemper ME, Shukla SK (2007) Pulsed-Field Gel Electrophoresis of MRSA, Methicillin-Resistant Staphylococcus aureus (MRSA). Protocols 391:59–69

    CAS  Google Scholar 

  14. Tenover FC, Arbeit RD, Goering RV et al (1995) Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: criteria for bacterial strain typing. J Clin Microbiol 33:2233–2239

    PubMed  CAS  Google Scholar 

  15. Applied Maths (2000) BioNumerics software v 2.5 Manual: the integral study of biological relationships. Applied Maths, Belgium. www.applied-maths.com

  16. Xie Y, He Y, Gehring AG et al (2011) Genotypes and enterotoxin gene profiles of Staphylococcus aureus clinical isolates from China. PLoS One 6:e28276

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2014 Springer Science+Business Media, LLC

About this protocol

Cite this protocol

He, Y., Xie, Y., Reed, S. (2014). Pulsed-Field Gel Electrophoresis Typing of Staphylococcus aureus Isolates. In: Ji, Y. (eds) Methicillin-Resistant Staphylococcus Aureus (MRSA) Protocols. Methods in Molecular Biology, vol 1085. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-62703-664-1_6

Download citation

  • DOI: https://doi.org/10.1007/978-1-62703-664-1_6

  • Published:

  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-1-62703-663-4

  • Online ISBN: 978-1-62703-664-1

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics