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Analysis of Complete Neuroblast Cell Lineages in the Drosophila Embryonic Brain via DiI Labeling

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Brain Development

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1082))

Abstract

Proper functioning of the brain relies on an enormous diversity of neural cells generated by neural stem cell-like neuroblasts (NBs). Each of the about 100 NBs in each side of brain generates a nearly invariant and unique cell lineage, consisting of specific neural cell types that develop in defined time periods. In this chapter we describe a method that labels entire NB lineages in the embryonic brain. Clonal DiI labeling allows us to follow the development of a NB lineage starting from the neuroectodermal precursor cell up to the fully developed cell clone in the first larval instar brain. We also show how to ablate individual cells within a NB clone, which reveals information about the temporal succession in which daughter cells are generated. Finally, we describe how to combine clonal DiI labeling with fluorescent antibody staining that permits relating protein expression to individual cells within a labeled NB lineage. These protocols make it feasible to uncover precise lineage relationships between a brain NB and its daughter cells, and to assign gene expression to individual clonal cells. Such lineage-based information is a critical key for understanding the cellular and molecular mechanisms that underlie specification of cell fates in spatial and temporal dimension in the embryonic brain.

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References

  1. Technau GM, Berger C, Urbach R (2006) Generation of cell diversity and segmental pattern in the embryonic central nervous system of Drosophila. Dev Dyn 235:861–869

    Article  PubMed  CAS  Google Scholar 

  2. Skeath JB (1999) At the nexus between pattern formation and cell-type specification: the generation of individual neuroblast fates in the Drosophila embryonic central nervous system. Bioessays 21:922–931

    Article  PubMed  CAS  Google Scholar 

  3. Urbach R, Technau GM (2004) Neuroblast formation and patterning during early brain development in Drosophila. Bioessays 26:739–751

    Article  PubMed  CAS  Google Scholar 

  4. Jacob J, Maurange C, Gould AP (2008) Temporal control of neuronal diversity: common regulatory principles in insects and vertebrates? Development 135:3481–3489

    Article  PubMed  CAS  Google Scholar 

  5. Kao C-F, Lee T (2010) Birth time/order-dependent neuron type specification. Curr Opin Neurobiol 20:14–21

    Article  PubMed  CAS  Google Scholar 

  6. Lin S, Lee T (2012) Generating neuronal diversity in the Drosophila central nervous system. Dev Dyn 241:57–68

    Article  PubMed  Google Scholar 

  7. Skeath JB, Thor S (2003) Genetic control of Drosophila nerve cord development. Curr Opin Neurobiol 13:8–15

    Article  PubMed  CAS  Google Scholar 

  8. Baumgardt M, Karlsson D, Terriente J et al (2009) Neuronal subtype specification within a lineage by opposing temporal feed-forward loops. Cell 139:969–982

    Article  PubMed  CAS  Google Scholar 

  9. Jefferis GS, Marin EC, Stocker RF et al (2001) Target neuron prespecification in the olfactory map of Drosophila. Nature 414:204–208

    Article  PubMed  CAS  Google Scholar 

  10. Lai S-L, Awasaki T, Ito K et al (2008) Clonal analysis of Drosophila antennal lobe neurons: diverse neuronal architectures in the lateral neuroblast lineage. Development 135: 2883–2893

    Article  PubMed  CAS  Google Scholar 

  11. Pearson BJ, Doe CQ (2004) Specification of temporal identity in the developing nervous system. Annu Rev Cell Dev Biol 20:619–647

    Article  PubMed  CAS  Google Scholar 

  12. Yu H-H, Lee T (2007) Neuronal temporal identity in post-embryonic Drosophila brain. Trends Neurosci 30:520–526

    Article  PubMed  CAS  Google Scholar 

  13. Yu H-H, Kao C-F, He Y et al (2010) A complete developmental sequence of a Drosophila neuronal lineage as revealed by twin-spot MARCM. PLoS Biol 8

    Google Scholar 

  14. Golic KG, Lindquist S (1989) The FLP recombinase of yeast catalyzes site-specific recombination in the Drosophila genome. Cell 59: 499–509

    Article  PubMed  CAS  Google Scholar 

  15. Xu T, Rubin GM (1993) Analysis of genetic mosaics in developing and adult Drosophila tissues. Development 117:1223–1237

    PubMed  CAS  Google Scholar 

  16. Evans CJ, Olson JM, Ngo KT et al (2009) G-TRACE: rapid Gal4-based cell lineage analysis in Drosophila. Nat Methods 6: 603–605

    Article  PubMed  CAS  Google Scholar 

  17. Lai S-L, Lee T (2006) Genetic mosaic with dual binary transcriptional systems in Drosophila. Nat Neurosci 9:703–709

    Article  PubMed  CAS  Google Scholar 

  18. Lee T, Luo L (1999) Mosaic analysis with a repressible cell marker for studies of gene function in neuronal morphogenesis. Neuron 22:451–461

    Article  PubMed  CAS  Google Scholar 

  19. Lee T (2009) New genetic tools for cell lineage analysis in Drosophila. Nat Methods 6: 566–568

    Article  PubMed  CAS  Google Scholar 

  20. Yu HH, Chen CH, Shi L et al (2009) Twin-spot MARCM to reveal the developmental origin and identity of neurons. Nat Neurosci 12:947–953

    Article  PubMed  CAS  Google Scholar 

  21. Larsen C, Shy D, Spindler SR et al (2009) Patterns of growth, axonal extension and axonal arborization of neuronal lineages in the developing Drosophila brain. Dev Biol 335:289–304

    Article  PubMed  CAS  Google Scholar 

  22. Luo L (2005) A practical guide: single-neuron labeling using genetic methods. In: Yuste R, Konnerth A (eds) Imaging in neuroscience and development. A laboratory manual. Cold Spring Harbor Laboratory, New York, NY, pp 99–110

    Google Scholar 

  23. Honig MG, Hume RI (1986) Fluorescent carbocyanine dyes allow living neurons of identified origin to be studied in long-term cultures. J Cell Biol 103:171–187

    Article  PubMed  CAS  Google Scholar 

  24. Honig MG, Hume RI (1989) Dil and DiO: versatile fluorescent dyes for neuronal labelling and pathway tracing. Trends Neurosci 12:333–340

    Article  PubMed  CAS  Google Scholar 

  25. Bossing T, Udolph G, Doe CQ et al (1996) The embryonic central nervous system lineages of Drosophila melanogaster. I. Neuroblast lineages derived from the ventral half of the neuroectoderm. Dev Biol 179: 41–64

    Article  PubMed  CAS  Google Scholar 

  26. Schmidt H, Rickert C, Bossing T et al (1997) The embryonic central nervous system lineages of Drosophila melanogaster. II. Neuroblast lineages derived from the dorsal part of the neuroectoderm. Dev Biol 189:186–204

    Article  PubMed  CAS  Google Scholar 

  27. Schmid A, Chiba A, Doe CQ (1999) Clonal analysis of Drosophila embryonic neuroblasts: neural cell types, axon projections and muscle targets. Development 126:4653–4689

    PubMed  CAS  Google Scholar 

  28. Kunz T, Kraft KF, Technau GM, Urbach R (2012) Origin of Drosophila mushroom body neuroblasts and generation of divergent embryonic lineages. Development 139: 2510–2522

    Article  PubMed  CAS  Google Scholar 

  29. Bossing T, Technau GM (1994) The fate of the CNS midline progenitors in Drosophila as revealed by a new method for single cell labelling. Development 120:1895–1906

    PubMed  CAS  Google Scholar 

  30. Campos-Ortega JA, Hartenstein V (1997) The embryonic development of Drosophila melanogaster. Springer, Berlin

    Book  Google Scholar 

  31. Elberger AJ, Honig MG (1990) Double-labeling of tissue containing the carbocyanine dye DiI for immunocytochemistry. J Histochem Cytochem 38:735–739

    Article  PubMed  CAS  Google Scholar 

  32. Maranto AR (1982) Neuronal mapping: a photooxidation reaction makes Lucifer yellow useful for electron microscopy. Science 217:953–955

    Article  PubMed  CAS  Google Scholar 

  33. von Bartheld CS, Cunningham DE, Rubel EW (1990) Neuronal tracing with DiI: decalcification, cryosectioning, and photoconversion for light and electron microscopic analysis. J Histochem Cytochem 38:725–733

    Article  Google Scholar 

  34. Foe VE (1989) Mitotic domains reveal early commitment of cells in Drosophila embryos. Development 107:1–22

    PubMed  CAS  Google Scholar 

  35. Urbach R, Schnabel R, Technau GM (2003) The pattern of neuroblast formation, mitotic domains and proneural gene expression during early brain development in Drosophila. Development 130:3589–3606

    Article  PubMed  CAS  Google Scholar 

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Acknowledgments

The authors thank Thomas Kunz, Martin Steimel, and Christof Rickert for sharing protocols and considerable expertise and David Jussen for critically reading the manuscript. We are grateful to Gerd Technau for his general support. This work was supported by grants from the Deutsche Forschungsgemeinschaft (UR163/2-1 and UR163/3-1) and by a research stipend to K.F.K. from the FTN of the University Mainz.

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Kraft, K.F., Urbach, R. (2014). Analysis of Complete Neuroblast Cell Lineages in the Drosophila Embryonic Brain via DiI Labeling. In: Sprecher, S. (eds) Brain Development. Methods in Molecular Biology, vol 1082. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-62703-655-9_3

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  • DOI: https://doi.org/10.1007/978-1-62703-655-9_3

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  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-1-62703-654-2

  • Online ISBN: 978-1-62703-655-9

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