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Application of Caged Fluorescent Nucleotides to Live-Cell RNA Imaging

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Nucleic Acid Detection

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1039))

Abstract

A caged fluorescent nucleic acid probe, which contains a nucleotide modified with one photolabile nitrobenzyl unit and two hybridization-sensitive thiazole orange units, has been synthesized for area-specific fluorescence imaging of RNA in a cell. The probe emits very weak fluorescence regardless of the presence of the complementary RNA, whereas it shows hybridization-sensitive fluorescence emission after photoirradiation for uncaging. Such probes are generated via several chemical synthetic steps and are applicable to area-specific RNA imaging in a cell. Only probes that exist in the defined irradiation area are activated via uncaging irradiation.

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Okamoto, A. (2013). Application of Caged Fluorescent Nucleotides to Live-Cell RNA Imaging. In: Kolpashchikov, D., Gerasimova, Y. (eds) Nucleic Acid Detection. Methods in Molecular Biology, vol 1039. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-62703-535-4_24

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  • DOI: https://doi.org/10.1007/978-1-62703-535-4_24

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  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-1-62703-534-7

  • Online ISBN: 978-1-62703-535-4

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