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Gold Nanoparticle–Oligonucleotide Conjugates for the Profiling of Malignant Melanoma Phenotypes

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NanoBiotechnology Protocols

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1026))

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Abstract

This chapter discusses the preparation and subsequent profiling capabilities of gold nanoparticle-oligonucleotide conjugates for multiple melanoma mRNA targets. We will outline the attachment of DNA hairpins modified with a thiol for facile attachment to gold nanoparticle surfaces through gold-sulfur bond formation. Furthermore, the ability of these conjugates to detect and distinguish phenotypic variations utilizing ­several melanoma cell lines and the nonmalignant cell line, HEp-2, will be investigated using flow cytometry and RT-PCR analytical techniques. The behavior of the housekeeping probe β-actin will also be investigated as a control.

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References

  1. National Cancer Institute (2006) National Foundation For Cancer Research. Research for a Cure (https://www.nfcr.org/skin-cancer)

  2. Goetz T (2009) The Truth About Cancer. WIRED Magazine Issue 17.01

    Google Scholar 

  3. Andres R, Mayordomo JI, Visus C, Isla D, Godino J, Escudero P, Saenz A, Ortega E, Lastra R, Lambea J, Aguirre E, Elosegui L, Marcos I, Ruiz-Echarri M, Millastre E, Saez-Gutierrez B, Asin L, Vidal MJ, Ferrer A, Giner A, Larrad L, Carapeto FJ, Tres A (2008) Prognostic significance and diagnostic value of protein S-100 and tyrosinase in patients with malignant melanoma. Am J Clin Oncol 31:335–339

    Article  CAS  Google Scholar 

  4. Gry M, Rimini R, Stromberg S, Asplund A, Ponten F, Uhlen M, Nilsson P (2009) Correlations between RNA and protein expression profiles in 23 human cell lines. BMC Genomics 10:365

    Article  Google Scholar 

  5. Mocellin S, Rossi CR, Pilati P, Nitti D, Marincola FM (2003) DNA array-based gene profiling. Trends Mol Med 9:189–195

    Article  CAS  Google Scholar 

  6. Nezos A, Lembessis P, Sourla A, Pissimissis N, Gogas H, Koutsilieris M (2009) Molecular markers detecting circulating melanoma cells by reverse transcription polymerase chain reaction: methodological pitfalls and clinical relevance. Clin Chem Lab Med 47:1–11

    Article  CAS  Google Scholar 

  7. de Vries TJ, Fourkour A, Punt CJ, Diepstra H, Ruiter DJ, van Muijen GN (1999) Melanoma-inhibiting activity (MIA) mRNA is not exclusively transcribed in melanoma cells: low levels of MIA mRNA are present in various cell types and in peripheral blood. Br J Cancer 81:1066–1070

    Article  Google Scholar 

  8. Bao G, Rhee WJ, Tsourkas A (2009) Fluorescent probes for live-cell RNA detection. Annu Rev Biomed Eng 11:25–47

    Article  CAS  Google Scholar 

  9. Santangelo P, Nitin N, Bao G (2006) Nanostructured probes for RNA detection in living cells. Ann Biomed Eng 34:39–50

    Article  Google Scholar 

  10. Santangelo P, Nitin N, LaConte L, Woolums A, Bao G (2006) Fluorescent probes for live-cell RNA detection. J Virol 80:682–688

    Article  CAS  Google Scholar 

  11. Santangelo PJ, Nitin N, Bao G (2005) Direct visualization of mRNA colocalization with mitochondria in living cells using molecular beacons. J Biomed Opt 10:44025

    Article  Google Scholar 

  12. Chen AK, Behike MA, Tsourkas A (2007) Avoiding false-positive signals with nuclease-vulnerable molecular beacons in single living cells. Nucleic Acids Res 35:1–12

    Google Scholar 

  13. Walev I, Bhakdi SC, Hofmann F, Djonder N, Valeva A, Aktories K, Bhakdi S (2001) Proc Natl Acad Sci USA 98:3185–3190

    Article  CAS  Google Scholar 

  14. Tsourkas A, Behlke MA, Bao G (2003) Hybridization kinetics and thermodynamics of molecular beacons. Nucleic Acids Res 31:5168–5174

    Article  Google Scholar 

  15. Tsourkas A, Behlke MA, Rose SD, Bao G (2003) Hybridization kinetics and thermodynamics of molecular beacons. Nucleic Acids Res 31:1319–1330

    Article  CAS  Google Scholar 

  16. Tyagi S, Kramer FR (1996) Molecular beacons: probes that fluoresce upon hybridization. Nat Biotechnol 14:303–308

    Article  CAS  Google Scholar 

  17. Rosi NL, Giljohann DA, Thaxton CS, Lytton-Jean AKR, Han MS, Mirkin CA (2006) Oligonucleotide-modified gold nanoparticles for intracellular gene regulation. Science 312:1027–1030

    Article  CAS  Google Scholar 

  18. Seferos DS, Giljohann DA, Hill HD, Prigodich AE, Mirkin CA (2007) Gold nanoparticles delivery in mammalian live cells: a critical review. J Am Chem Soc 129:15477–15479

    Article  CAS  Google Scholar 

  19. Hearing VJ, Tsukamoto K (1991) Enzymatic control of pigmentation in mammals. FASEB J 5:2902–2909

    CAS  Google Scholar 

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Stone, J.W., Harry, R., Hendley, O., Wright, D.W. (2013). Gold Nanoparticle–Oligonucleotide Conjugates for the Profiling of Malignant Melanoma Phenotypes. In: Rosenthal, S., Wright, D. (eds) NanoBiotechnology Protocols. Methods in Molecular Biology, vol 1026. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-62703-468-5_9

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  • DOI: https://doi.org/10.1007/978-1-62703-468-5_9

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  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-1-62703-467-8

  • Online ISBN: 978-1-62703-468-5

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