Abstract
Protein N-terminal acetylation is a widespread modification in eukaryotes catalyzed by N-terminal acetyltransferases (NATs). The various NATs and their specific substrate specificities and catalytic mechanisms are far from fully understood. We here describe an in vitro method based on reverse-phase HPLC to quantitatively measure in vitro acetylation of NAT oligopeptide substrates, enabling the determination of NAT specificity as well as kinetic parameters.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Arnesen T, Van Damme P, Polevoda B, Helsens K, Evjenth R, Colaert N et al (2009) Proteomics analyses reveal the evolutionary conservation and divergence of N-terminal acetyltransferases from yeast and humans. Proc Natl Acad Sci U S A 106:8157–8162
Polevoda B, Arnesen T, Sherman F (2009) A synopsis of eukaryotic Nalpha-terminal acetyltransferases: nomenclature, subunits and substrates. BMC Proc 3(Suppl 6):S2
Van Damme P, Hole K, Pimenta-Marques A, Helsens K, Vandekerckhove J, Martinho RG et al (2011) NatF contributes to an evolutionary shift in protein N-terminal acetylation and is important for normal chromosome segregation. PLoS Genet 7(7):e1002169
Van Damme P, Evjenth R, Foyn H, Demeyer K, De Bock PJ, Lillehaug JR et al (2011) Proteome-derived peptide libraries allow detailed analysis of the substrate specificities of N{alpha}-acetyltransferases and point to hNaa10p as the posttranslational actin N{alpha}-acetyltransferase. Mol Cell Proteomics 10:M110.004580
Evjenth R, Hole K, Karlsen OA, Ziegler M, Arnesen T, Lillehaug JR (2009) Human Naa50p (Nat5/San) displays both protein N alpha- and N epsilon-acetyltransferase activity. J Biol Chem 284:31122–31129
Evjenth R, Hole K, Ziegler M, Lillehaug JR (2009) Application of reverse-phase HPLC to quantify oligopeptide acetylation eliminates interference from unspecific acetyl CoA hydrolysis. BMC Proc 3(Suppl 6):S5
Berndsen CE, Denu JM (2005) Assays for mechanistic investigations of protein/histone acetyltransferases. Methods 36:321–331
Acknowledgements
P.V.D. is a postdoctoral fellow of the research foundation—Flanders (FWO-Vlaanderen). K.G. acknowledges support of research grants from the Fund for Scientific Research—Flanders (Belgium) (project numbers G.0042.07 and G.0440.10), the Concerted Research Actions (project BOF07/GOA/012) from the Ghent University, and the Inter University Attraction Poles (IUAP06). T.A. is supported by the Norwegian Research Council (Grant 197136), and the Norwegian Cancer Society.
Author information
Authors and Affiliations
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2013 Springer Science+Business Media, LLC
About this protocol
Cite this protocol
Evjenth, R.H., Van Damme, P., Gevaert, K., Arnesen, T. (2013). HPLC-Based Quantification of In Vitro N-Terminal Acetylation. In: Hake, S., Janzen, C. (eds) Protein Acetylation. Methods in Molecular Biology, vol 981. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-62703-305-3_7
Download citation
DOI: https://doi.org/10.1007/978-1-62703-305-3_7
Published:
Publisher Name: Humana Press, Totowa, NJ
Print ISBN: 978-1-62703-304-6
Online ISBN: 978-1-62703-305-3
eBook Packages: Springer Protocols