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Transcriptome Profiling Analysis Using Rice Oligonucleotide Microarrays

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Rice Protocols

Part of the book series: Methods in Molecular Biology ((MIMB,volume 956))

Abstract

Transcriptome analysis using oligonucleotide microarrays is a powerful tool for detecting changes in genome-wide transcripts under a given biological condition. Although the rice genome sequence is available, the number of functionally characterized genes in rice is still very limited. Genome-wide transcriptome analysis is a useful tool for elucidating the functions of rice genes that have not yet been determined. Currently, more than 3,000 arrays are publicly available. Here, we introduce methods for genome-wide transcriptome analysis in rice.

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Correspondence to Pamela C. Ronald .

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Jung, KH., Ronald, P.C. (2013). Transcriptome Profiling Analysis Using Rice Oligonucleotide Microarrays. In: Yang, Y. (eds) Rice Protocols. Methods in Molecular Biology, vol 956. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-62703-194-3_8

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  • DOI: https://doi.org/10.1007/978-1-62703-194-3_8

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  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-1-62703-193-6

  • Online ISBN: 978-1-62703-194-3

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