Abstract
Mitochondrial energy metabolism depends upon high-flux and low-flux electron transfer pathways. The former provide the energy to support chemiosmotic coupling for oxidative phosphorylation. The latter provide mechanisms for signaling and control of mitochondrial functions. Few practical methods are available to measure rates of individual mitochondrial electron transfer reactions; however, a number of approaches are available to measure steady-state redox potentials (E h) of donor/acceptor couples, and these can be used to gain insight into rate-controlling reactions as well as mitochondrial bioenergetics. Redox changes within the respiratory electron transfer pathway are quantified by optical spectroscopy and measurement of changes in autofluorescence. Low-flux pathways involving thiol/disulfide redox couples are measured by redox western blot and mass spectrometry-based redox proteomics. Together, the approaches provide the opportunity to develop integrated systems biology descriptions of mitochondrial redox signaling and control mechanisms.
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References
Mitchell P (1979) Keilin’s respiratory chain concept and its chemiosmotic consequences. Science 206:1148–1159
Chance B, Sies H, Boveris A (1979) Hydroperoxide metabolism in mammalian organs. Physiol Rev 59:527–605
Meredith MJ, Reed DJ (1982) Status of the mitochondrial pool of glutathione in the isolated hepatocyte. J Biol Chem 257:3747–3753
Wallace DC (1999) Mitochondrial diseases in man and mouse. Science 283:1482–1488
Jones DP (2006) Disruption of mitochondrial redox circuitry in oxidative stress. Chem Biol Interact 163:38–53
Chance B (1957) Cellular oxygen requirements. Fed Proc 16:671–680
Taylor ER, Hurrell F, Shannon RJ, Lin TK, Hirst J, Murphy MP (2003) Reversible Âglutathionylation of complex I increases mitochondrial superoxide formation. J Biol Chem 278:19603–19610
Zhang R, Al-Lamki R, Bai L et al (2004) Thioredoxin-2 inhibits mitochondria-located ASK1-mediated apoptosis in a JNK-independent manner. Circ Res 94:1483–1491
Lillig CH, Berndt C, Vergnolle O et al (2005) Characterization of human glutaredoxin 2 as iron-sulfur protein: a possible role as redox sensor. Proc Natl Acad Sci USA 102:8168–8173
Go YM, Pohl J, Jones DP (2009) Quantification of redox conditions in the nucleus. Methods Mol Biol 464:303–317
Jones DP (1984) Effect of mitochondrial clustering on O2 supply in hepatocytes. Am J Physiol 247:C83–C89
Schafer FQ, Buettner GR (2001) Redox environment of the cell as viewed through the redox state of the glutathione disulfide/glutathione couple. Free Radic Biol Med 30:1191–1212
Chance B (1954) Spectrophotometry of intracellular respiratory pigments. Science 120:767–775
Keilin D (1966) The history of cell respiration and cytochrome. Cambridge University Press, Cambridge
Chance B (1952) Spectra and reaction kinetics of respiratory pigments of homogenized and intact cells. Nature 169:215–221
Jones DP, Thor H, Andersson B, Orrenius S (1978) Detoxification reactions in isolated hepatocytes. Role of glutathione peroxidase, catalase, and formaldehyde dehydrogenase in reactions relating to N-demethylation by the cytochrome P-450 system. J Biol Chem 253:6031–6037
Tamura M, Hazeki O, Nioka S, Chance B (1989) In vivo study of tissue oxygen metabolism using optical and nuclear magnetic resonance spectroscopies. Annu Rev Physiol 51:813–834
Jones DP (1981) Determination of pyridine dinucleotides in cell extracts by high-performance liquid chromatography. J Chromatogr 225:446–449
Williamson JR, Corkey BE (1969) Assays of intermediates of the citric acid cycle and related components by fluorometric enzyme methods. Methods Enzymol 13:434–513
Sies H (1982) Nicotinamide nucleotide compartmentation. In: Sies H (ed) Metabolic compartmentation. Academic, London, pp 205–231
Kirwan GM, Coffey VG, Niere JO, Hawley JA, Adams MJ (2009) Spectroscopic correlation analysis of NMR-based metabonomics in exercise science. Anal Chim Acta 652:173–179
Beylot M, Beaufrère B, Normand S, Riou JP, Cohen R, Momex R (1986) Determination of human ketone body kinetics using stable-isotope labelled tracers. Diabetologia 29:90–96
Jones DP, Kennedy FG (1982) Intracellular oxygen supply during hypoxia. Am J Physiol 243:C247–C253
Chance B, Schoener B (1962) Correlation of oxidation-reduction changes of intracellular reduced pyridine nucleotide and changes in electroencephalogram of the rat in anoxia. Nature 195:956–958
Chance B, Cohen P, Jobsis F, Schoener B (1962) Intracellular oxidation-reduction states in vivo. Science 137:499–508
Song Y, Buettner GR (2010) Thermodynamic and kinetic considerations for the reaction of semiquinone radicals to form superoxide and hydrogen peroxide. Free Radic Biol Med 49(6):919–962
Yamamoto Y, Yamashita S (2002) Ubiquinol/ubiquinone ratio as a marker of oxidative stress. Methods Mol Biol 186:241–246
Matsubara M, Ranji M, Leshnower BG et al (2010) In vivo fluorometric assessment of cyclosporine on mitochondrial function during myocardial ischemia and reperfusion. Ann Thorac Surg 89:1532–1537
Scholz R, Thurman RG, Williamson JR, Chance B, Bucher T (1969) Flavin and pyridine nucleotide oxidation-reduction changes in perfused rat liver. I. Anoxia and subcellular localization of fluorescent flavoproteins. J Biol Chem 244:2317–2324
Tamura M, Oshino N, Chance B, Silver IA (1978) Optical measurements of intracellular oxygen concentration of rat heart in vitro. Arch Biochem Biophys 191:8–22
Estabrook RW (1961) Studies of oxidative phosphorylation with potassium ferricyanide as electron acceptor. J Biol Chem 236:3051–3057
Jones DP, Orrenius S, Mason HS (1979) Hemoprotein quantitation in isolated hepatocytes. Biochim Biophys Acta 576:17–29
Aw TY, Andersson BS, Jones DP (1987) Suppression of mitochondrial respiratory function after short-term anoxia. Am J Physiol 252:C362–C368
Jones DP (1982) Intracellular catalase function: analysis of the catalytic activity by product formation in isolated liver cells. Arch Biochem Biophys 214:806–814
Guidot DM, Repine JE, Kitlowski AD et al (1995) Mitochondrial respiration scavenges extramitochondrial superoxide anion via a nonenzymatic mechanism. J Clin Invest 96:1131–1136
Jones DP (2006) Redefining oxidative stress. Antioxid Redox Signal 8:1865–1879
Sies H, Jones DP (2007) Oxidative stress. In: Fink G (ed) Encyclopedia of stress, 2nd edn. Elsevier, New York, pp 45–48
Zhang H, Go YM, Jones DP (2007) Mitochondrial thioredoxin-2/peroxiredoxin-3 system functions in parallel with mitochondrial GSH system in protection against oxidative stress. Arch Biochem Biophys 465:119–126
Jones DP (2008) Radical-free biology of oxidative stress. Am J Physiol Cell Physiol 295:C849–C868
Halvey PJ, Watson WH, Hansen JM, Go YM, Samali A, Jones DP (2005) Compartmental oxidation of thiol-disulphide redox couples during epidermal growth factor signalling. Biochem J 386:215–219
Wood ZA, Schroder E, Robin Harris J, Poole LB (2003) Structure, mechanism and regulation of peroxiredoxins. Trends Biochem Sci 28:32–40
Cox AG, Winterbourn CC, Hampton MB (2010) Measuring the redox state of cellular peroxiredoxins by immunoblotting. Methods Enzymol 474:51–66
Padgett CM, Whorton AR (1995) S-nitrosoglutathione reversibly inhibits GAPDH by S-nitrosylation. Am J Physiol 269:C739–C749
Stadtman TC (2002) Discoveries of vitamin B12 and selenium enzymes. Annu Rev Biochem 71:1–16
Gasdaska PY, Gasdaska JR, Cochran S, Powis G (1995) Cloning and sequencing of a human thioredoxin reductase. FEBS Lett 373:5–9
Mustacich D, Powis G (2000) Thioredoxin reductase. Biochem J 346(Pt 1):1–8
Soini Y, Kahlos K, Napankangas U et al (2001) Widespread expression of thioredoxin and thioredoxin reductase in non-small cell lung carcinoma. Clin Cancer Res 7:1750–1757
Kim JR, Lee SM, Cho SH et al (2004) Oxidation of thioredoxin reductase in HeLa cells stimulated with tumor necrosis factor-alpha. FEBS Lett 567:189–196
Go YM, Park H, Koval M et al (2010) A key role for mitochondria in endothelial signaling by plasma cysteine/cystine redox potential. Free Radic Biol Med 48:275–283
Holmgren A, Fagerstedt M (1982) The in vivo distribution of oxidized and reduced thioredoxin in Escherichia coli. J Biol Chem 257:6926–6930
Roede JR, Jones DP (2010) Reactive species and mitochondrial dysfunction: mechanistic significance of 4-hydroxynonenal. Environ Mol Mutagen 51:380–390
Requejo R, Chouchani ET, Hurd TR, Menger KE, Hampton MB, Murphy MP (2010) Measuring mitochondrial protein thiol redox state. Methods Enzymol 474:123–147
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Supported by NIH grants ES009047, ES011195, and ES012870.
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Roede, J.R., Go, YM., Jones, D.P. (2012). Redox Equivalents and Mitochondrial Bioenergetics. In: Palmeira, C., Moreno, A. (eds) Mitochondrial Bioenergetics. Methods in Molecular Biology, vol 810. Humana Press. https://doi.org/10.1007/978-1-61779-382-0_17
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DOI: https://doi.org/10.1007/978-1-61779-382-0_17
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