Skip to main content

Methods for Constructing Clones for Protein Expression in Mammalian Cells

  • Protocol
  • First Online:
Protein Expression in Mammalian Cells

Part of the book series: Methods in Molecular Biology ((MIMB,volume 801))

Abstract

Multisite Gateway technology is a DNA cloning method based on in vitro site-specific recombination that is becoming increasingly popular because it allows quick and highly efficient assembly of multiple DNA fragments into a vector backbone. In the conventional Gateway Multisite strategy, cloning of multiple DNA fragments requires recombination of multiple entry clones with a single destination vector. The ­limitation of this approach is that as the number of entry clones increases, the efficiency of the assembly reactions decreases due to difficulty in successfully recognizing multiple pairs of matched att signals simultaneously. To address this problem, we have devised methods to generate modular expression clones, modular entry clones, and modular destination vectors. These allow many DNA fragments to be ­assembled stepwise into complex expression clones. We describe here how to construct these intermediate clones and vectors, and how to use these modules to construct expression clones comprising ten or more DNA ­segments. These principles can be applied to make multicomponent DNAs for many applications.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 89.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 119.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Hartley, J. L., Temple, G. F., and Brasch, M. A. (2000) DNA cloning using in vitro site-specific recombination. Genome Res 10, 1788–95.

    Article  PubMed  CAS  Google Scholar 

  2. Sasaki, Y., Sone, T., Yoshida, S., Yahata, K., Hotta, J., Chesnut, J. D., Honda, T., and Imamoto, F. (2004) Evidence for high specificity and efficiency of multiple recombination signals in mixed DNA cloning by the Multisite Gateway system. J Biotechnol 107, 233–43.

    Article  PubMed  CAS  Google Scholar 

  3. Cheo, D. L., Titus, S. A., Byrd, D. R., Hartley, J. L., Temple, G. F., and Brasch, M. A. (2004) Concerted assembly and cloning of multiple DNA segments using in vitro site-specific recombination: functional analysis of multi-segment expression clones. Genome Res 14, 2111–20.

    Article  PubMed  CAS  Google Scholar 

  4. Sone, T., Yahata, K., Sasaki, Y., Hotta, J., Kishine, H., Chesnut, J. D., and Imamoto, F. (2008) Multi-gene gateway clone design for expression of multiple heterologous genes in living cells: modular construction of multiple cDNA expression elements using recombinant cloning. J Biotechnol 136, 113–21.

    Article  PubMed  CAS  Google Scholar 

  5. Sasaki, Y., Sone, T., Yahata, K., Kishine, H., Hotta, J., Chesnut, J. D., Honda, T., and Imamoto, F. (2008) Multi-gene gateway clone design for expression of multiple heterologous genes in living cells: eukaryotic clones containing two and three ORF multi-gene cassettes expressed from a single promoter. J Biotechnol 136, 103–12.

    Article  PubMed  CAS  Google Scholar 

  6. Yahata, K., Maeshima, K., Sone, T., Ando, T., Okabe, M., Imamoto, N., and Imamoto, F. (2007) cHS4 insulator-mediated alleviation of promoter interference during cell-based ­expression of tandemly associated transgenes. J Mol Biol 374, 580–90.

    Article  PubMed  CAS  Google Scholar 

  7. Sone, T., Nishiumi, F., Yahata, K., Sasaki, Y., Kishine, H., Andoh, T., Inoue, K., Thyagarajan, B., Chesnut, J. D., and Imamoto, F. (2009) 21. Cell engineering using integrase and recombinase systems. in Emerging Technology Platforms for Stem Cells (Lakshmipathy, U., Chesnut, J. D., and Thyagarajan, B., Eds.) pp 379–394, John Wiley & Sons, Hoboken.

    Google Scholar 

  8. Messing, J. (1991) Cloning in M13 phage or how to use biology at its best. Gene 100, 3–12.

    Article  PubMed  CAS  Google Scholar 

  9. O’Gorman, S., Fox, D. T., and Wahl, G. M. (1991) Recombinase-mediated gene activation and site-specific integration in mammalian cells. Science 251, 1351–1355.

    Article  PubMed  Google Scholar 

  10. Chalberg, T. W., Portlock, J. L., Olivares, E. C., Thyagarajan, B., Kirby, P. J., Hillman, R. T., Hoelters, J., and Calos, M. P. (2006) Integration specificity of phage phiC31 integrase in the human genome. J Mol Biol 357, 28–48.

    Article  PubMed  CAS  Google Scholar 

  11. Thyagarajan, B., Liu, Y., Shin, S., Lakshmipathy, U., Scheyhing, K., Xue, H., Ellerstrom, C., Strehl, R., Hyllner, J., Rao, M. S., and Chesnut, J. D. (2008) Creation of engineered human embryonic stem cell lines using phiC31 integrase. Stem Cells 26, 119–26.

    Article  PubMed  CAS  Google Scholar 

  12. Olivares, E. C., Hollis, R. P., and Calos, M. P. (2001) Phage R4 integrase mediates site-specific integration in human cells. Gene 278, 167–76.

    Article  PubMed  CAS  Google Scholar 

  13. Kagawa, N., Kemmochi, K., and Tanaka, S. (2004) One-step adapter PCR method for HTP Gateway technology cloning. QUEST 1, 37–39.

    Google Scholar 

Download references

Acknowledgments

The authors are grateful to Dr. Jonathan D. Chesnut (Lifetechnologies Corp.) for providing att signal sequences of MultiSite Gateway and information for construction.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Fumio Imamoto .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2012 Springer Science+Business Media, LLC

About this protocol

Cite this protocol

Sone, T., Imamoto, F. (2012). Methods for Constructing Clones for Protein Expression in Mammalian Cells. In: Hartley, J. (eds) Protein Expression in Mammalian Cells. Methods in Molecular Biology, vol 801. Humana Press. https://doi.org/10.1007/978-1-61779-352-3_15

Download citation

  • DOI: https://doi.org/10.1007/978-1-61779-352-3_15

  • Published:

  • Publisher Name: Humana Press

  • Print ISBN: 978-1-61779-351-6

  • Online ISBN: 978-1-61779-352-3

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics