Skip to main content

Functional Analysis of Abscisic Acid 8′-Hydroxylase

  • Protocol
  • First Online:
Seed Dormancy

Part of the book series: Methods in Molecular Biology ((MIMB,volume 773))

Abstract

Abscisic acid (ABA) plays an important role in the control of seed dormancy and germination. Identification of hormone metabolism genes from a particular plant species of interest is an essential step in hormone research. The function of these gene products is validated by biochemical analysis using heterologous expression systems, such as E. coli and yeast. ABA 8′-hydroxylase is a subfamily of P450 monooxygenases and is encoded by CYP707A genes. CYP707A catalyzes the committed step in the major ABA catabolic pathway. In this chapter, we describe the methods for RNA extraction from seeds, cloning the CYP707A cDNAs, protein expression in yeast, and biochemical analysis of their gene products.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 89.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 119.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Nambara, E. and Marion-Poll, A. (2005) Abscisic acid biosynthesis and catabolism. Annu. Rev. Plant Biol. 56, 165–85.

    Article  PubMed  CAS  Google Scholar 

  2. Suzuki, Y., Mae, T. and Makino, A. (2008) RNA extraction from various recalcitrant plant tissues with a cethyltrimethylammonium bromide-containing buffer followed by an acid guanidium thiocyanate-phenol-chloroform treatment. Biosci. Biotechnol. Biochem. 72, 1951–3.

    Article  PubMed  CAS  Google Scholar 

  3. Birtic, S. and Kranner, I. (2006) Isolation of high-quality RNA from polyphenol-, polysaccharide- and lipid-rich seeds. Phytochem Anal 17, 144–8.

    Article  PubMed  CAS  Google Scholar 

  4. Kushiro, T., Okamoto, M., Nakabayashi, K., Yamagishi, K., Kitamura, S., Asami, T., Hirai, N., Koshiba, T., Kamiya, Y. and Nambara, E. (2004) The Arabidopsis cytochrome P450 CYP707A encodes ABA 8′-hydroxylases: key enzymes in ABA catabolism. EMBO J. 23, 1647–56.

    Article  PubMed  CAS  Google Scholar 

  5. Sawada, Y., Aoki, M., Nakaminami, K., Mitsuhashi, W., Tatematsu, K., Kushiro, T., Koshiba, T., Kamiya, Y., Inoue, Y., Nambara, E. and Toyomasu, T. (2008) Phytochrome- and gibberellin-mediated regulation of abscisic acid metabolism during germination of photoblastic lettuce seeds. Plant Physiol. 146, 1386–96.

    Article  PubMed  CAS  Google Scholar 

  6. Pompon, D., Lauerat, B., Bronine, A. and Urban, P. (1996) Yeast expression of animal and plant P450s in optimized redox environments. Methods Enzymol. 272, 51–64.

    Article  PubMed  CAS  Google Scholar 

  7. Okamoto, M., Hanada, A., Kamiya, Y., Yamaguchi, S., and Nambara, E. (2009) Measurements of abscisic acid and gibberellins by gas chromatography-mass spectrometry, in Methods Mol. Biol. Plant Hormones 2nd edition (Cutler, S., and Bonetta, D. ed), Humana, Totowa, NJ, 495, 53–60.

    Google Scholar 

  8. Saika, H., Okamoto, M., Miyoshi, K., Kushiro, T., Shinoda, S., Jikumaru, Y., Fujimoto, M., Arikawa, T., Takahashi, H., Ando, M., Arimura, S., Miyao, A., Hirochika, H., Kamiya, Y., Tsutsumi, N., Nambara, E. and Nakazono, M. (2007) Ethylene promotes submergence-induced expression of OsABA8ox1, a gene that encodes ABA 8′-hydroxylase in rice. Plant Cell Physiol. 48, 287–98.

    Article  PubMed  CAS  Google Scholar 

  9. Zaharia, L.I., Walker-Simmons, M.K., Rodríguez, C.N. and Abrams, S.R. (2005) Chemistry of abscisic acid, abscisic acid catabolites and analogs. J. Plant Growth Regul. 24, 274–84.

    Article  CAS  Google Scholar 

  10. Hirai, N., Kondo, S. and Ohigashi, H. (2003) Deuterium-labeled phaseic acid and dihydrophaseic acids for internal standards. Biosci. Biotechnol. Biochem. 67, 2408–15.

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Eiji Nambara .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2011 Springer Science+Business Media, LLC

About this protocol

Cite this protocol

Endo, A., Kimura, M., Kawakami, N., Nambara, E. (2011). Functional Analysis of Abscisic Acid 8′-Hydroxylase. In: Kermode, A. (eds) Seed Dormancy. Methods in Molecular Biology, vol 773. Humana Press. https://doi.org/10.1007/978-1-61779-231-1_9

Download citation

  • DOI: https://doi.org/10.1007/978-1-61779-231-1_9

  • Published:

  • Publisher Name: Humana Press

  • Print ISBN: 978-1-61779-230-4

  • Online ISBN: 978-1-61779-231-1

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics