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Use of Zebrafish and Knockdown Technology to Define Proprotein Convertase Activity

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Proprotein Convertases

Part of the book series: Methods in Molecular Biology ((MIMB,volume 768))

Abstract

The Zebrafish (Danio rerio) is a powerful and well-established tool used extensively for the study of early vertebrate development and as a model of human diseases. Zebrafish genes orthologous to their mammalian counterparts generally share conserved biological function. Protein knockdown or overexpression can be effectively achieved by microinjection of morpholino antisense oligonucleotides (MOs) or mRNA, respectively, into developing embryos at the one- to two-cell stage. Correlating gene expression patterns with the characterizing of phenotypes resulting from over- or underexpression can reveal the function of a particular protein. The microinjection technique is simple and results are reproducible. We defined the expression pattern of the proprotein convertase PCSK5 within the lateral line neuromasts and various organs including the liver, gut and otic vesicle by whole-mount in situ hybridization (ISH) and immunofluorescence (IF). MO-mediated knockdown of zebrafish PCSK5 expression generated embryos that display abnormal neuromast deposition within the lateral line system resulting in uncoordinated patterns of swimming.

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References

  1. Zon, L. I. (1999) Zebrafish: A new model for human disease Genome Res 2, 121–9.

    Google Scholar 

  2. Graham, J. L., and Peter, D. C. (2007) Animal models of human disease: Zebrafish swim into view Nature Reviews Genetics 8, 353–67.

    Article  Google Scholar 

  3. Kari, G., Rodeck, U., and Dicker, A. P. (2007) Zebrafish: An emerging model system for human disease and drug discovery Clin Pharmacol Ther 82, 70–80.

    Article  PubMed  CAS  Google Scholar 

  4. Love, D. R., Pichler, F. B., Dodd, A., Copp, B. R., and Greenwood, D. R. (2004) Technology for high- throughput screens: The present and future using zebrafish Curr Opin Biotechnol 15, 564–71.

    Article  PubMed  CAS  Google Scholar 

  5. Guo, S. (2009) Using zebrafish to assess the impact of drugs on neural development and function Expert Opin Drug Discov 7, 715–26.

    Article  Google Scholar 

  6. Ausoni, S., and Sartore, S. (2009) From fish to amphibians to mammals: In search of novel strategies to optimize cardiac regeneration J Cell Biol 184, 357–64.

    Article  PubMed  CAS  Google Scholar 

  7. Major, R. J., and Poss, K. D. (2007) Zebrafish heart regeneration as a model for cardiac tissue repair Drug Discov Today Dis Models 4, 219–25.

    Article  PubMed  Google Scholar 

  8. Cadieux, B., Chitramuthu, B. P., Baranowski, D., and Bennett, H. P. (2005) The zebrafish progranulin gene family and antisense transcripts BMC Genomics 6, 156.

    Article  PubMed  Google Scholar 

  9. Poirier, S., Prat, A., Marcinkiewicz, E., Paquin, J., Chitramuthu, B. P., Baranowski, D., Cadieux, B., Bennett, H. P. J., and Seidah, N. G. (2006) Implication of the proprotein convertase NARC-1/PCSK9 in the development of the nervous system J Neurochem 98, 838–50.

    Article  PubMed  CAS  Google Scholar 

  10. Westerfield, M. (2007) The Zebrafish Book, 5th Edition. A guide for the laboratory use of zebrafish (Danio rerio). Eugene, OR: University of Oregon Press (4th Edition available online).

    Google Scholar 

  11. Nasevicius, A., and Ekker, S. C. (2000) Effective targeted gene ‘knockdown’ in zebrafish Nature Genet 26, 216–20.

    Article  PubMed  CAS  Google Scholar 

  12. Chitramuthu, B. P., Baranowski, D. C., Cadieux, B., Rousselet, E., Seidah, N. G., and Bennett, H. P. (2010) Molecular cloning and embryonic experssion of zebrafish PCSK5 co-orthologues: Functional assessment during lateral line development. Dev Dyn 239, 2933–46.

    Google Scholar 

  13. Kimmel, C. B., Ballard, W. W., Kimmel, S. R., Ullmann, B., and Schilling, T. F. (1995) Stages of embryonic development of the zebrafish Dev Dyn 203, 253–310.

    Article  PubMed  CAS  Google Scholar 

  14. Culp, P., Nusslein-Volhard, C., and Hopkins, N. (1991) High frequency germline transmission of plasmid DNA sequences injected into fertilised zebrafish eggs Proc Natl Acad Sci USA 88, 7953–7.

    Article  PubMed  CAS  Google Scholar 

  15. Lusson, J., Vieau, D., Hamelin, J., Day, R., Chrétien, M., and Seidah, N. G. (1993) cDNA structure of the mouse and rat subtilisin/kexin-like PC5: A candidate proprotein convertase expressed in endocrine and nonendocrine cells Proc Natl Acad Sci USA 90, 6691–5.

    Article  PubMed  CAS  Google Scholar 

  16. Krauss, S., Concordet, J. P., and Ingham, P. W. (1993) A functionally conserved homolog of the Drosophila segment polarity gene hh is expressed in tissues with polarizing activity in zebrafish embryos Cell 75, 1431–44.

    Article  PubMed  CAS  Google Scholar 

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Correspondence to Babykumari P. Chitramuthu .

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Chitramuthu, B.P., Bennett, H.P. (2011). Use of Zebrafish and Knockdown Technology to Define Proprotein Convertase Activity. In: Mbikay, M., Seidah, N. (eds) Proprotein Convertases. Methods in Molecular Biology, vol 768. Humana Press. https://doi.org/10.1007/978-1-61779-204-5_15

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  • DOI: https://doi.org/10.1007/978-1-61779-204-5_15

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  • Publisher Name: Humana Press

  • Print ISBN: 978-1-61779-203-8

  • Online ISBN: 978-1-61779-204-5

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