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Tandem Affinity Purification and Identification of GPCR-Associated Protein Complexes

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Receptor Signal Transduction Protocols

Part of the book series: Methods in Molecular Biology ((MIMB,volume 746))

Abstract

The first tandem affinity purification (TAP) protocol was described in 1999. Originally designed for the purification of protein complexes in yeast RNA splicing, its application rapidly expanded towards whole proteome analysis in yeast and mammalian cells. More recently, TAP has been applied to the purification of G protein-coupled receptor (GPCR)-associated protein complexes (GAPCs). This approach is particularly attractive for GPCRs, as the native, seven transmembrane structure is used as bait to purify GAPCs from mammalian cells expressing receptors at physiological levels. Here, a detailed protocol of the TAP method applied to GPCRs is presented.

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References

  1. Rosenbaum, D. M., Rasmussen, S. G., and Kobilka, B. K. (2009) The structure and function of G-protein-coupled receptors. Nature 459, 356–363

    Article  PubMed  CAS  Google Scholar 

  2. Nakatani, Y., and Ogryzko, V. (2003) Immunoaffinity purification of mammalian protein complexes. Methods Enzymol 370, 430–444

    Article  PubMed  CAS  Google Scholar 

  3. Angers, S., Thorpe, C. J., Biechele, T. L., Goldenberg, S. J., Zheng, N., MacCoss, M. J., and Moon, R. T. (2006) The KLHL12-Cullin-3 ubiquitin ligase negatively regulates the Wnt-beta-catenin pathway by targeting Dishevelled for degradation. Nat Cell Biol 8, 348–357

    Article  PubMed  CAS  Google Scholar 

  4. Bouwmeester, T., Bauch, A., Ruffner, H., Angrand, P. O., Bergamini, G., Croughton, K., Cruciat, C., Eberhard, D., Gagneur, J., Ghidelli, S., Hopf, C., Huhse, B., Mangano, R., Michon, A. M., Schirle, M., Schlegl, J., Schwab, M., Stein, M. A., Bauer, A., Casari, G., Drewes, G., Gavin, A. C., Jackson, D. B., Joberty, G., Neubauer, G., Rick, J., Kuster, B., and Superti-Furga, G. (2004) A physical and functional map of the human TNF-alpha/NF-kappa B signal transduction pathway. Nat Cell Biol 6, 97–105

    Article  PubMed  CAS  Google Scholar 

  5. Gavin, A. C., Bosche, M., Krause, R., Grandi, P., Marzioch, M., Bauer, A., Schultz, J., Rick, J. M., Michon, A. M., Cruciat, C. M., Remor, M., Hofert, C., Schelder, M., Brajenovic, M., Ruffner, H., Merino, A., Klein, K., Hudak, M., Dickson, D., Rudi, T., Gnau, V., Bauch, A., Bastuck, S., Huhse, B., Leutwein, C., Heurtier, M. A., Copley, R. R., Edelmann, A., Querfurth, E., Rybin, V., Drewes, G., Raida, M., Bouwmeester, T., Bork, P., Seraphin, B., Kuster, B., Neubauer, G., and Superti-Furga, G. (2002) Functional organization of the yeast proteome by systematic analysis of protein complexes. Nature 415, 141–147

    Article  PubMed  CAS  Google Scholar 

  6. Daulat, A. M., Maurice, P., Froment, C., Guillaume, J. L., Broussard, C., Monsarrat, B., Delagrange, P., and Jockers, R. (2007) Purification and identification of G protein-­coupled receptor protein complexes under native conditions. Mol Cell Proteomics 6, 835–844

    Article  PubMed  CAS  Google Scholar 

  7. Lyssand, J. S., DeFino, M. C., Tang, X. B., Hertz, A. L., Feller, D. B., Wacker, J. L., Adams, M. E., and Hague, C. (2008) Blood pressure is regulated by an alpha1D-adrenergic receptor/dystrophin signalosome. J Biol Chem 283, 18792–18800

    Article  PubMed  CAS  Google Scholar 

  8. Wacker, J. L., Feller, D. B., Tang, X. B., Defino, M. C., Namkung, Y., Lyssand, J. S., Mhyre, A. J., Tan, X., Jensen, J. B., and Hague, C. (2008) Disease-causing mutation in GPR54 reveals the importance of the second intracellular loop for class A G-protein-coupled receptor function. J Biol Chem 283, 31068–31078

    Article  PubMed  CAS  Google Scholar 

  9. Rigaut, G., Shevchenko, A., Rutz, B., Wilm, M., Mann, M., and Seraphin, B. (1999) A generic protein purification method for protein ­complex characterization and proteome exploration. Nat Biotechnol 17, 1030–1032

    Article  PubMed  CAS  Google Scholar 

  10. Rabilloud, T. (1999) Silver staining of 2-D electrophoresis gels. Methods Mol Biol 112, 297–305

    PubMed  CAS  Google Scholar 

  11. Wisniewski, J. R., Zougman, A., Nagaraj, N., and Mann, M. (2009) Universal sample preparation method for proteome analysis. Nat Methods 6, 359–362

    Article  PubMed  CAS  Google Scholar 

  12. Daulat, A. M., Maurice, P., and Jockers, R. (2009) Recent methodological advances in the discovery of GPCR-associated protein complexes. Trends Pharmacol Sci 30, 72–78

    Article  PubMed  CAS  Google Scholar 

  13. Maurice, P., Daulat, A. M., Broussard, C., Mozo, J., Clary, G., Hotellier, F., Chafey, P., Guillaume, J. L., Ferry, G., Boutin, J. A., Delagrange, P., Camoin, L., and Jockers, R. (2008) A generic approach for the purification of signaling complexes that specifically interact with the carboxyl-terminal domain of G protein-coupled receptors. Mol Cell Proteomics 7, 1556–1569

    Article  PubMed  CAS  Google Scholar 

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Acknowledgments

We thank Dr. Luc Camoin for help in establishing proteomics procedures in our laboratory and Patty Chen for help in preparing the manuscript. AMD held an EGID fellowship.

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Correspondence to Ralf Jockers .

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Daulat, A.M., Maurice, P., Jockers, R. (2011). Tandem Affinity Purification and Identification of GPCR-Associated Protein Complexes. In: Willars, G., Challiss, R. (eds) Receptor Signal Transduction Protocols. Methods in Molecular Biology, vol 746. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-61779-126-0_23

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  • DOI: https://doi.org/10.1007/978-1-61779-126-0_23

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  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-1-61779-125-3

  • Online ISBN: 978-1-61779-126-0

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