Skip to main content

Analysis of SUMOylation of Topoisomerase IIα with Xenopus Egg Extracts

  • Protocol
  • First Online:
DNA Topoisomerases

Part of the book series: Methods in Molecular Biology™ ((MIMB,volume 582))

Abstract

Posttranslational protein modification by the Small Ubiquitin-like MOdifiers (SUMO) is involved in many cellular functions including organization of nuclear structures and chromatin, transcriptional regulation, and nucleo-cytoplasmic transport. Both genetic and biochemical studies indicate that the SUMO modification pathway plays an important role in proper cell cycle control, especially in the normal progression of mitosis. DNA topoisomerase II has been shown to be modified by SUMO in budding yeast as well as in vertebrates. We have shown by biochemical analysis using the Xenopus egg extract (XEE) cell-free assay system that DNA topoisomerase IIα (Topo IIα) is modified by SUMO-2/3 on mitotic chromosomes in the early stages of mitosis. Inhibition of mitotic SUMOylation in the XEE assay system causes aberrant sister chromatid separation in anaphase and alters Topo IIα association with chromosomes.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 149.00
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 109.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Hay, R. T. (2005) SUMO: a history of modification. Mol Cell 18, 1–12.

    Article  PubMed  CAS  Google Scholar 

  2. Johnson, E. S. (2004) Protein modification by sumo. Annu Rev Biochem 73, 355–382.

    Article  PubMed  CAS  Google Scholar 

  3. Dasso, M. (2008) Emerging roles of the SUMO pathway in mitosis. Cell Div 3, 5.

    Article  PubMed  Google Scholar 

  4. Mukhopadhyay, D. and Dasso, M. (2007) Modification in reverse: the SUMO proteases. Trends Biochem Sci 32, 286–295.

    Article  PubMed  CAS  Google Scholar 

  5. Hay, R. T. (2007) SUMO-specific proteases: a twist in the tail. Trends Cell Biol 17, 370–376.

    Article  PubMed  CAS  Google Scholar 

  6. Yanagida, M. (2005) Basic mechanism of eukaryotic chromosome segregation. Philos Trans R Soc Lond B Biol Sci 360, 609–621.

    Article  PubMed  CAS  Google Scholar 

  7. Holm, C., Goto, T., Wang, J. C. and Botstein, D. (1985) DNA topoisomerase II is required at the time of mitosis in yeast. Cell 41, 553–563.

    Article  PubMed  CAS  Google Scholar 

  8. Uemura, T. and Yanagida, M. (1984) Isolation of type I and II DNA topoisomerase mutants from fission yeast: single and double mutants show different phenotypes in cell growth and chromatin organization. EMBO J 3, 1737–1744.

    PubMed  CAS  Google Scholar 

  9. Hirano, T. and Mitchison, T. J. (1993) Topoisomerase II does not play a scaffolding role in the organization of mitotic chromosomes assembled in Xenopus egg extracts. J Cell Biol 120, 601–612.

    Article  PubMed  CAS  Google Scholar 

  10. Adachi, Y., Luke, M. and Laemmli, U. K. (1991) Chromosome assembly in vitro: topoisomerase II is required for condensation. Cell 64, 137–148.

    Article  PubMed  CAS  Google Scholar 

  11. Cuvier, O. and Hirano, T. (2003) A role of topoisomerase II in linking DNA replication to chromosome condensation. J Cell Biol 160, 645–655.

    Article  PubMed  CAS  Google Scholar 

  12. Shamu, C. E. and Murray, A. W. (1992) Sister chromatid separation in frog egg extracts requires DNA topoisomerase II activity during anaphase. J Cell Biol 117, 921–934.

    Article  PubMed  CAS  Google Scholar 

  13. Takahashi, Y., Yong-Gonzalez, V., Kikuchi, Y. and Strunnikov, A. (2006) SIZ1/SIZ2 control of chromosome transmission fidelity is mediated by the sumoylation of topoisomerase II. Genetics 172, 783–794.

    Article  PubMed  CAS  Google Scholar 

  14. Bachant, J., Alcasabas, A., Blat, Y., Kleckner, N. and Elledge, S. J. (2002) The SUMO-1 isopeptidase Smt4 is linked to centromeric cohesion through SUMO-1 modification of DNA topoisomerase II. Mol Cell 9, 1169–1182.

    Article  PubMed  CAS  Google Scholar 

  15. Azuma, Y., Arnaoutov, A. and Dasso, M. (2003) SUMO-2/3 regulates topoisomerase II in mitosis. J Cell Biol 163, 477–487.

    Article  PubMed  CAS  Google Scholar 

  16. Mao, Y., Desai, S. D. and Liu, L. F. (2000) SUMO-1 conjugation to human DNA topoisomerase II isozymes. J Biol Chem 275, 26066–26073.

    Article  PubMed  CAS  Google Scholar 

  17. Agostinho, M., Santos, V., Ferreira, F., Costa, R., Cardoso, J., Pinheiro, I., Rino, J., Jaffray, E., Hay, R. T. and Ferreira, J. (2008) Conjugation of human topoisomerase 2 alpha with small ubiquitin-like modifiers 2/3 in response to topoisomerase inhibitors: cell cycle stage and chromosome domain specificity. Cancer Res 68, 2409–2418.

    Article  PubMed  CAS  Google Scholar 

  18. Desai, A., Murray, A., Mitchison, T. J. and Walczak, C. E. (1999) The use of Xenopus egg extracts to study mitotic spindle assembly and function in vitro. Methods Cell Biol 61, 385–412.

    Article  PubMed  CAS  Google Scholar 

  19. Kornbluth, S., Yang, J. and Powers, M. (2001) Analysis of the cell cycle using Xenopus egg extracts. In Current Protocols in Cell Biology, K. M. Yamada, ed. (New York: John Wiley & Sons, Inc.), pp. 11.11.11–11.11.13.

    Google Scholar 

  20. Chen, R. H. and Murray, A. (1997) Characterization of spindle assembly checkpoint in Xenopus egg extracts. Methods Enzymol 283, 572–584.

    PubMed  CAS  Google Scholar 

Download references

Acknowledgments

I would like to thank to Mary Dasso for critical reading and her support. This work was supported by NIH/NCRR, CCET-COBRE (P20 RR015563), and is currently supported by NIH/NIGMS (GM080278).

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2009 Humana Press, a part of Springer Science+Business Media, LLC

About this protocol

Cite this protocol

Azuma, Y. (2009). Analysis of SUMOylation of Topoisomerase IIα with Xenopus Egg Extracts. In: Clarke, D. (eds) DNA Topoisomerases. Methods in Molecular Biology™, vol 582. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-60761-340-4_17

Download citation

  • DOI: https://doi.org/10.1007/978-1-60761-340-4_17

  • Published:

  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-1-60761-339-8

  • Online ISBN: 978-1-60761-340-4

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics