Skip to main content

Identification of Oxidative Stress-Induced Tyrosine Phosphorylated Proteins by Immunoprecipitation and Mass Spectrometry

  • Protocol
Phospho-Proteomics

Part of the book series: Methods in Molecular Biology™ ((MIMB,volume 527))

Summary

Oxidative stress is the result of an increased presence of reactive oxygen species (ROS) in cells and is able to promote, among others, protein and lipid oxidation, DNA damage, mutagenesis, oncogenic activation, or inhibition of tumour suppression, resulting in pathological processes such as myocardial dysfunction or carcinogenesis. External treatment of cells with oxidants such as H2O2 or high intracellular levels of ROS has been shown to trigger protein tyrosine phosphorylation. This occurs, at least in part, through the oxidation of reactive cysteine groups in protein tyrosine phosphatases resulting in an inhibition of their activities. Herein, we focus on the characterization of stress-induced protein tyrosine phosphorylation events in a cellular model of human mammary luminal epithelial cells (HB4a cells) stimulated with H2O2, in an attempt to better understand the mechanisms by which oxidative stress could promote such phenomena. Thus, immunoprecipitation with anti-phosphotyrosine antibodies and mass spectrometry have allowed us to identify a number of phosphorylated proteins that respond to oxidative stress and thereby further probe the effects of these changes on cellular function.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 159.00
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 109.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Ames, B. N., Gold, L. S., and Willett, W. C. (1995) The causes and prevention of cancer. Proc Natl Acad Sci USA 92, 5258–65.

    Article  PubMed  CAS  Google Scholar 

  2. Olinski, R., Gackowski, D., Foksinski, M., Rozalski, R., Roszkowski, K., and Jaruga, P. (2002) Oxidative DNA damage: assessment of the role in carcinogenesis, atherosclerosis, and acquired immunodeficiency syndrome. Free Radic Biol Med 33, 192–200.

    Article  PubMed  CAS  Google Scholar 

  3. Taniyama, Y., and Griendling, K. K. (2003) Reactive oxygen species in the vasculature: molecular and cellular mechanisms. Hypertension 42, 1075–81.

    Article  PubMed  CAS  Google Scholar 

  4. Sbarra, A. J., and Karnovsky, M. L. (1959) The biochemical basis of phagocytosis. I. Metabolic changes during the ingestion of particles by polymorphonuclear leukocytes. J Biol Chem 234, 1355–62.

    PubMed  CAS  Google Scholar 

  5. Rollet-Labelle, E., Grange, M. J., Elbim, C., Marquetty, C., Gougerot-Pocidalo, M. A., and Pasquier, C. (1998) Hydroxyl radical as a potential intracellular mediator of polymor-phonuclear neutrophil apoptosis. Free Radic Biol Med 24, 563–72.

    Article  PubMed  CAS  Google Scholar 

  6. Jackson, A. L., and Loeb, L. A. (2001) The contribution of endogenous sources of DNA damage to the multiple mutations in cancer. Mutat Res 477, 7–21.

    Article  PubMed  CAS  Google Scholar 

  7. Suh, Y. A., Arnold, R. S., Lassegue, B., Shi, J., Xu, X., Sorescu, D., Chung, A. B., Griendling, K. K., and Lambeth, J. D. (1999) Cell transformation by the superoxide-generating oxidase Mox1. Nature 401, 79–82.

    Article  PubMed  CAS  Google Scholar 

  8. zatrowski, T. P., and Nathan, C. F. (1991) Production of large amounts of hydrogen peroxide by human tumor cells. Cancer Res 51, 794–8.

    Google Scholar 

  9. Rhee, S. G. (1999) Redox signaling: hydrogen peroxide as intracellular messenger. Exp Mol Med 31, 53–9.

    PubMed  CAS  Google Scholar 

  10. Behrend, L., Henderson, G., and Zwacka, R. M. (2003) Reactive oxygen species in oncogenic transformation. Biochem Soc Trans 31, 1441–4.

    Article  PubMed  CAS  Google Scholar 

  11. Sundaresan, M., Yu, Z. X., Ferrans, V. J., Irani, K., and Finkel, T. (1995) Requirement for generation of H2O2 for platelet-derived growth factor signal transduction. Science 270, 296–9.

    Article  PubMed  CAS  Google Scholar 

  12. Rhee, S. G., Chang, T. S., Bae, Y. S., Lee, S. R., and Kang, S. W. (2003) Cellular regulation by hydrogen peroxide. J Am Soc Nephrol 14, S211–5.

    Article  PubMed  CAS  Google Scholar 

  13. Guyton, K. Z., Liu, Y., Gorospe, M., Xu, Q., and Holbrook, N. J. (1996) Activation of mitogen-activated protein kinase by H2O2. Role in cell survival following oxidant injury. J Biol Chem 271, 4138–42.

    Article  PubMed  CAS  Google Scholar 

  14. Bae, Y. S., Sung, J. Y., Kim, O. S., Kim, Y. J., Hur, K. C., Kazlauskas, A., and Rhee, S. G. (2000) Platelet-derived growth factor-induced H(2)O(2) production requires the activation of phosphatidylinositol 3-kinase. J Biol Chem 275, 10527–31.

    Article  PubMed  CAS  Google Scholar 

  15. Manna, S. K., Zhang, H. J., Yan, T., Oberley, L. W., and Aggarwal, B. B. (1998) Overex-pression of manganese superoxide dismutase suppresses tumor necrosis factor-induced apoptosis and activation of nuclear transcription factor-kappaB and activated protein-1. J Biol Chem 273, 13245–54.

    Article  PubMed  CAS  Google Scholar 

  16. Rhee, S. G., Bae, Y. S., Lee, S. R., and Kwon, J. (2000) Hydrogen peroxide: a key messenger that modulates protein phosphor ylation through cysteine oxidation. Sci STKE 2000, E1.

    Google Scholar 

  17. Wu, Y., Kwon, K. S., and Rhee, S. G. (1998) Probing cellular protein targets of H2O2 with fluorescein-conjugated iodoacetamide and antibodies to fluorescein. FEBS Lett 440, 111–5.

    Article  PubMed  CAS  Google Scholar 

  18. Stamps, A. C., Davies, S. C., Burman, J., and O'Hare, M. J. (1994) Analysis of proviral integration in human mammary epithelial cell lines immortalized by retroviral infection with a temperature-sensitive SV40 T-antigen construct. Int J Cancer 57, 865–74.

    Article  PubMed  CAS  Google Scholar 

  19. Laemmli, U. K. (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227, 680–5.

    Article  PubMed  CAS  Google Scholar 

  20. Shevchenko, A., Wilm, M., Vorm, O., and Mann, M. (1996) Mass spectrometric sequencing of proteins silver-stained polyacry-lamide gels. Anal Chem 68, 850–8.

    Article  PubMed  CAS  Google Scholar 

  21. Carr, S., Aebersold, R., Baldwin, M., Burl-ingame, A., Clauser, K., and Nesvizhskii, A. (2004) The need for guidelines in publication of peptide and protein identification data: Working Group on Publication Guidelines for Peptide and Protein Identification Data. Mol Cell Proteomics 3, 531–3.

    Article  PubMed  CAS  Google Scholar 

  22. Clauser, K. R., Baker, P., and Burlingame, A. L. (1999) Role of accurate mass measurement (+/− 10 ppm) in protein identification strategies employing MS or MS/MS and database searching. Anal Chem 71, 2871–82.

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2009 Springer Science+Business Media, LLC

About this protocol

Cite this protocol

Duran, M.C., Chan, HL., Timms, J.F. (2009). Identification of Oxidative Stress-Induced Tyrosine Phosphorylated Proteins by Immunoprecipitation and Mass Spectrometry. In: Graauw, M.d. (eds) Phospho-Proteomics. Methods in Molecular Biology™, vol 527. Humana Press. https://doi.org/10.1007/978-1-60327-834-8_3

Download citation

  • DOI: https://doi.org/10.1007/978-1-60327-834-8_3

  • Publisher Name: Humana Press

  • Print ISBN: 978-1-60327-833-1

  • Online ISBN: 978-1-60327-834-8

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics