Skip to main content
Book cover

Retinoids pp 85–94Cite as

In Vitro Assays of Rod and Cone Opsin Activity: Retinoid Analogs as Agonists and Inverse Agonists

  • Protocol
  • First Online:

Part of the book series: Methods in Molecular Biology ((MIMB,volume 652))

Abstract

Upon absorption of a photon, the bound 11-cis-retinoid isomerizes to the all-trans form resulting in a protein conformational change that enables it to activate its G protein, transducin, to begin the visual signal transduction cascade. The native ligand, 11-cis-retinal, acts as an inverse agonist to both the apoproteins of rod and cone visual pigments (opsins); all-trans-retinal is an agonist. Truncated analogs of retinal have been used to characterize structure–function relationships with rod opsins, but little has been done with cone opsins. Activation of transducin by an opsin is one method to characterize the conformational state of the opsin. This chapter describes an in vitro transducin activation assay that can be used with cone opsins to determine the degree to which different ligands can act as an agonist or an inverse agonist to gain insight into the ligand-binding pocket of cone opsins and differences between the different classes of opsins. The understanding of the effects of ligands on cone opsin activity can potentially be applied to future therapeutic agents targeting opsins.

This is a preview of subscription content, log in via an institution.

Buying options

Protocol
USD   49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD   89.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD   119.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD   169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Learn about institutional subscriptions

Springer Nature is developing a new tool to find and evaluate Protocols. Learn more

References

  1. Lou, J., Tan, Q., Karnaukhova, E., Berova, N., Nakanishi, K., Crouch, R.K. (2000) Synthetic retinals: Convenient probes of rhodopsin and visual transduction process. Methods Enzymol. 315, 219–237.

    Article  PubMed  CAS  Google Scholar 

  2. Cohen, G.B., Yang, T., Robinson, P.R., Oprian, D.D. (1993) Constitutive activation of opsin: Influence of charge at position 134 and size at position 296. Biochemistry 32, 6111–6115.

    Article  PubMed  CAS  Google Scholar 

  3. Surya, A., Foster, K.W., Knox, B.E. (1995) Transducin activation by the bovine opsin apoprotein. J. Biol. Chem. 270, 5024–5031.

    Article  PubMed  CAS  Google Scholar 

  4. Isayama, T., Chen, Y., Kono, M., DeGrip, W.J., Ma, J.-X., Crouch, R.K., Makino, C.L. (2006) Differences in the pharmacological activation of visual opsins. Vis. Neurosci. 23, 899–908.

    Article  PubMed  CAS  Google Scholar 

  5. Kono, M. (2006) Constitutive activity of a UV cone opsin. FEBS Lett. 580, 229–232.

    Article  PubMed  CAS  Google Scholar 

  6. Melia, T.J., Jr., Cowan, C.W., Angleson, J.K., Wensel, T.G. (1997) A comparison of the efficiency of G protein activation by ligand-free and light-activated forms of rhodopsin. Biophys. J. 73, 3182–3191.

    Article  PubMed  CAS  Google Scholar 

  7. Bartl, F.J., Fritze, O., Ritter, E., Herrmann, R., Kuksa, V., Palczewski, K., Hofmann, K.P., Ernst, O.P. (2005) Partial agonism in a G protein-coupled receptor. Role of the retinal ring structure in rhodopsin activation. J. Biol. Chem. 280, 34259–34267.

    Article  PubMed  CAS  Google Scholar 

  8. Han, M., Groesbeek, M., Sakmar, T.P., Smith, S.O. (1997) The C9 methyl group of retinal interacts with glycine-121 in rhodopsin. Proc. Natl. Acad. Sci. USA 94, 13442–13447.

    Article  PubMed  CAS  Google Scholar 

  9. Buczylko, J., Saari, J.C., Crouch, R.K., Palczewski, K. (1996) Mechanisms of opsin activation. J. Biol. Chem. 271, 20621–20630.

    Article  PubMed  CAS  Google Scholar 

  10. Zhukovsky, E.A., Robinson, P.R., Oprian, D.D. (1991) Transducin activation by rhodopsin without a covalent bond to the 11-cis-retinal chromophore. Science 251, 558–560.

    Article  PubMed  CAS  Google Scholar 

  11. Ramon, E., Mao, X., Ridge, K.D. (2009) Studies on the stability of the human cone visual pigments. Photochem. Photobiol. 85, 509–516.

    Article  PubMed  CAS  Google Scholar 

  12. Crescitelli, F. (1984) The gecko visual pigment: The dark exchange of chromophore. Vision Res. 24, 1551–1553.

    Article  PubMed  CAS  Google Scholar 

  13. Kefalov, V.J., Estevez, M.E., Kono, M., Goletz, P.W., Crouch, R.K., Cornwall, M.C., Yau, K.-W. (2005) Breaking the covalent bond – a pigment property that contributes to desensitization in cones. Neuron 46, 879–890.

    Article  PubMed  CAS  Google Scholar 

  14. Matsumoto, H., Tokunaga, F., Yoshizawa, T. (1975) Accessibility of the iodopsin chromophore. Biochim. Biochem. Acta 404, 300–308.

    Article  CAS  Google Scholar 

  15. Ala-Laurila, P., Cornwall, M.C., Crouch, R.K., Kono, M. (2009) The action of 11-cis-retinol on cone opsins and intact cone photoreceptors. J. Biol. Chem. 284, 16492–16500.

    Article  PubMed  CAS  Google Scholar 

  16. Das, J., Crouch, R.K., Ma, J.-X., Oprian, D.D., Kono, M. (2004) Role of the 9-methyl group of retinal in cone visual pigments. Biochemistry 43, 5532–5538.

    Article  PubMed  CAS  Google Scholar 

  17. Jones, G.J., Crouch, R.K., Wiggert, B., Cornwall, M.C., Chader, G.J. (1989) Retinoid requirements for recovery of sensitivity after visual-pigment bleaching in isolated photoreceptors. Proc. Natl. Acad. Sci. USA 86, 9606–9610.

    Article  PubMed  CAS  Google Scholar 

  18. Kono, M., Goletz, P.W., Crouch, R.K. (2008) 11-cis and all-trans retinols can activate rod opsin: Rational design of the visual cycle. Biochemistry 47, 7567–7571.

    Article  PubMed  CAS  Google Scholar 

  19. Oprian, D.D. (1993) Expression of opsin genes in COS cells. Methods Neurosci. 15, 301–306.

    Google Scholar 

  20. Kono, M., Crouch, R.K., Oprian, D.D. (2005) A dark and constitutively active mutant of the tiger salamander UV pigment. Biochemistry 44, 799–804.

    Article  PubMed  CAS  Google Scholar 

  21. Robinson, P.R. (2000) Assays for the detection of constitutively active opsins. Methods Enzymol. 315, 207–218.

    Article  PubMed  CAS  Google Scholar 

  22. Baehr, W., Morita, E.A., Swanson, R.J., Applebury, M.L. (1982) Characterization of bovine rod outer segment G-protein. J. Biol. Chem. 257, 6452–6460.

    PubMed  CAS  Google Scholar 

  23. Wessling-Resnick, M., Johnson, G.L. (1987) Allosteric behavior in transducin activation mediated by rhodopsin. J. Biol. Chem. 262, 3697–3705.

    PubMed  CAS  Google Scholar 

  24. Yu, H., Kono, M., McKee, T.D., Oprian, D.D. (1995) A general method for mapping tertiary contacts between amino acid residues in membrane-embedded proteins. Biochemistry 34, 14963–14969.

    Article  PubMed  CAS  Google Scholar 

  25. Nathans, J. (1990) Determinants of visual pigment absorbance: Identification of the retinylidene Schiff’s base counterion in bovine rhodopsin. Biochemistry 29, 9746–9752.

    Article  PubMed  CAS  Google Scholar 

  26. Tsutsui, K., Imai, H., Shichida, Y. (2007) Photoisomerization efficiency in UV-absorbing visual pigments: Protein-directed isomerization of an unprotonated retinal Schiff base. Biochemistry 46, 6437–6445.

    Article  PubMed  CAS  Google Scholar 

  27. Vissers, P.M.A.M., Bovee-Geurts, P.H.M., Portier, M.D., Klaassen, C.H.W., DeGrip, W.J. (1998) Large-scale production and purification of the human green cone pigment: Characterization of late photo-intermediates. Biochem. J. 330, 1201–1208.

    PubMed  CAS  Google Scholar 

  28. Rim, J., Oprian, D.D. (1995) Constitutive activation of opsin: Interaction of mutants with rhodopsin kinase and arrestin. Biochemistry 34, 11938–11945.

    Article  PubMed  CAS  Google Scholar 

  29. Han, M., Groesbeek, M., Smith, S.O., Sakmar, T.P. (1998) Role of the C9 methyl group in rhodopsin activation: Characterization of mutant opsins with the artificial chromophore 11-cis-9-demethylretinal. Biochemistry 37, 538–545.

    Article  PubMed  CAS  Google Scholar 

  30. Okano, T., Fukada, Y., Artamonov, I.D., Yoshizawa, T. (1989) Purification of cone visual pigments from chicken retina. Biochemistry 28, 8848–8856.

    Article  PubMed  CAS  Google Scholar 

  31. Liang, J., Govindjee, R., Ebrey, T.G. (1993) Metarhodopsin intermediates of the gecko cone pigment P521. Biochemistry 32, 14187–14193.

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2010 Springer Science+Business Media, LLC

About this protocol

Cite this protocol

Kono, M., Crouch, R.K. (2010). In Vitro Assays of Rod and Cone Opsin Activity: Retinoid Analogs as Agonists and Inverse Agonists. In: Sun, H., Travis, G. (eds) Retinoids. Methods in Molecular Biology, vol 652. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-60327-325-1_4

Download citation

  • DOI: https://doi.org/10.1007/978-1-60327-325-1_4

  • Published:

  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-1-60327-324-4

  • Online ISBN: 978-1-60327-325-1

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics