Skip to main content

Protein Pyrophosphorylation by Diphosphoinositol Pentakisphosphate (InsP 7)

  • Protocol
  • First Online:
Inositol Phosphates and Lipids

Part of the book series: Methods in Molecular Biology ((MIMB,volume 645))

Abstract

Diphosphoinositol polyphosphates, also known as inositol pyrophosphates, are a family of water soluble inositol phosphates that possess diphosphate or pyrophosphate moieties. In the presence of divalent cations such as Mg2+, the “high energy” β phosphate can be transferred from the inositol pyrophosphates, InsP 7 and InsP 8, to prephosphorylated serine residues on proteins, to form pyrophosphoserine. This chapter provides detailed methods to identify proteins that are substrates for pyrophosphorylation by InsP 7, conduct phosphorylation assays on purified protein, and detect protein pyrophosphorylation.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 84.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 109.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 109.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Bennett, M., Onnebo, S. M., Azevedo, C., and Saiardi, A. (2006) Inositol pyrophosphates: metabolism and signaling. Cell Mol Life Sci 63, 552–564.

    Article  CAS  PubMed  Google Scholar 

  2. Burton, A., Hu, X., and Saiardi, A. (2009) Are inositol pyrophosphates signalling molecules? J Cell Physiol 220, 8–15.

    Article  CAS  PubMed  Google Scholar 

  3. Illies, C., Gromada, J., Fiume, R., Leibiger, B., Yu, J., et al. (2007) Requirement of inositol pyrophosphates for full exocytotic capacity in pancreatic cells. Science 318, 1299–1302.

    Article  CAS  PubMed  Google Scholar 

  4. Bhandari, R., Juluri, K. R., Resnick, A. C., and Snyder, S. H. (2008) Gene deletion of inositol hexakisphosphate kinase 1 reveals inositol pyrophosphate regulation of insulin secretion, growth, and spermiogenesis. Proc Natl Acad Sci USA 105, 2349–2353.

    Article  CAS  PubMed  Google Scholar 

  5. Luo, H. R., Huang, Y. E., Chen, J. C., Saiardi, A., Iijima, M., et al. (2003) Inositol pyrophosphates mediate chemotaxis in Dictyostelium via pleckstrin homology domain-PtdIns(3,4,5)P3 interactions. Cell 114, 559–572.

    Article  CAS  PubMed  Google Scholar 

  6. Lee, Y. S., Huang, K., Quiocho, F. A., and O’Shea, E. K. (2008) Molecular basis of cyclin-CDK-CKI regulation by reversible binding of an inositol pyrophosphate. Nat Chem Biol 4, 25–32.

    Article  CAS  PubMed  Google Scholar 

  7. Saiardi, A., Bhandari, R., Resnick, A. C., Snowman, A. M., and Snyder, S. H. (2004) Phosphorylation of proteins by inositol pyrophosphates. Science 306, 2101–2105.

    Article  CAS  PubMed  Google Scholar 

  8. Bhandari, R., Saiardi, A., Ahmadibeni, Y., Snowman, A. M., Resnick, A. C., et al. (2007) Protein pyrophosphorylation by inositol pyrophosphates is a posttranslational event. Proc Natl Acad Sci USA 104, 15305–15310.

    Article  CAS  PubMed  Google Scholar 

  9. Yan, T., Yoo, D., Berardini, T. Z., Mueller, L. A., Weems, D. C., et al. (2005) PatMatch: a program for finding patterns in peptide and nucleotide sequences. Nucleic Acids Res 33, W262–W266.

    Article  CAS  PubMed  Google Scholar 

  10. Gietz, R. D., and Woods, R. A. (2002) Transformation of yeast by lithium acetate/single-stranded carrier DNA/polyethylene glycol method. Meth Enzymol 350, 87–96.

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgements

We thank Adolfo Saiardi and Solomon H. Snyder for suggestions and helpful comments. This work is supported by the Department of Biotechnology, Government of India, and The Wellcome Trust, UK.

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2010 Springer Science+Business Media, LLC

About this protocol

Cite this protocol

Werner, J.K., Speed, T., Bhandari, R. (2010). Protein Pyrophosphorylation by Diphosphoinositol Pentakisphosphate (InsP 7). In: Barker, C. (eds) Inositol Phosphates and Lipids. Methods in Molecular Biology, vol 645. Humana Press. https://doi.org/10.1007/978-1-60327-175-2_6

Download citation

  • DOI: https://doi.org/10.1007/978-1-60327-175-2_6

  • Published:

  • Publisher Name: Humana Press

  • Print ISBN: 978-1-60327-174-5

  • Online ISBN: 978-1-60327-175-2

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics