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Web-Based Resources for Clinical Bioinformatics

  • Protocol
Clinical Bioinformatics

Part of the book series: Methods in Molecular Medicine™ ((MIMM,volume 141))

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Summary

In the post-Human Genome Project era, awareness of the resources available through the internet is essential to both molecular biologists and clinicians. An overview of the main databases and analytical tools described in this chapter is important to understand the principles upon which hypotheses are generated, experiments are based and conclusions reached. Similarly, an introduction to the terminology of these resources often facilitates their use and adoption into practice. This chapter covers database resources such as NCBI/ Entrez, Ensembl and UCSC as well as analytical tools for sequence alignment, promoter analysis and molecular interactions.

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Abbreviations

BLAST:

Basic Local Alignment Search Tool

DDBJ:

DNA Data Bank of Japan

EMBL:

European Molecular Biology Laboratory

EST:

Expressed Sequence Tag

NCBI:

National Centre for Biotechnology Information

UCSC:

University of California, Santa Cruz

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Author information

Authors and Affiliations

  1. Department of Medical Oncology, Princess Margaret Hospital, Toronto, Canada

    Anthony M. Joshua

  2. Department of Medical Biophysics, University of Toronto, Ontario, Canada

    Paul C. Boutros

Authors
  1. Anthony M. Joshua
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  2. Paul C. Boutros
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Editor information

Editors and Affiliations

  1. Department of Molecular and Clinical Genetics, University of Sydney Central Clinical School Royal Prince Alfred Hospital, Camperdown, New South Wales, Australia

    Ronald J.A. Trent

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© 2008 Humana Press, a part of Springer Science+Business Media, LLC

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Joshua, A.M., Boutros, P.C. (2008). Web-Based Resources for Clinical Bioinformatics. In: Trent, R.J. (eds) Clinical Bioinformatics. Methods in Molecular Medicine™, vol 141. Humana Press. https://doi.org/10.1007/978-1-60327-148-6_17

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  • DOI: https://doi.org/10.1007/978-1-60327-148-6_17

  • Publisher Name: Humana Press

  • Print ISBN: 978-1-58829-791-4

  • Online ISBN: 978-1-60327-148-6

  • eBook Packages: Springer Protocols

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