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Application of High-Throughput Methodologies to the Expression of Recombinant Proteins in E. coli

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Part of the book series: Methods in Molecular Biology™ ((MIMB,volume 426))

Despite the large body of knowledge accumulated on recombinant protein expression, production, primarily of eukaryotic proteins, remains a challenge. The biggest obstacle is in obtaining large amounts of a given protein in a correctly folded form. Several strategies are being used to increase both yields and solubility. These include expression with fusion proteins, co-expression with molecular chaperones or a protein partner, and use of multiple constructs for each protein. Any given method may help to increase expression and solubility for a given protein, but often more than one rescue strategy should be tried. To perform several different rescue strategies on multiple proteins, high throughout (HTP) methodologies are applied. This chapter presents HTP methodologies for DNA cloning in multiple expression vectors and expression screening to identify clones capable of producing soluble proteins.

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References

  1. Albeck, S., Burstein, Y., Dym, O., Jacobovitch, Y., Levi, N., Meged, R., Michael, Y., Peleg, Y., Prilusky, J., Schreiber, G., Silman, I., Unger, T., and Sussman, J. L. (2005) 3D structure determination of proteins related to human health in their functional context at the Israel Structural Proteomics Center (ISPC). Acta Cryst. D61, 1364–1372.

    CAS  Google Scholar 

  2. Aricescu, A. R., Assenberg, R., Bill, R. M., Busso, D., Chang, V. T., Davis, S. J., Dubrovsky, A., Gustafsson, L., Hedfalk, K., Heinemann, U., Jones, I. M., Ksiazek, D., Lang, C., Maskos, K., Messerschmidt, A., Macieira, S., Peleg, Y., Perrakis, A., Poterszman, A., Schneider, G., Sixma, T. K., Sussman, J. L., Sutton, G., Tarboureich, N., Zeev-Ben-Mordehai, T., and Jones, E. Y. (2006) Eukaryotic expression: developments for structural proteomics. Acta Cryst. D62, 1114–1124.

    CAS  Google Scholar 

  3. Romier, C., Ben Jelloul, M., Albeck, S., Buchwald, G., Busso, D., Celie, P. H., Christodoulou, E., De Marco, V., van Gerwen, S., Knipscheer, P., Lebbink, J. H., Notenboom, V., Poterszman, A., Rochel, N., Cohen, S. X., Unger, T., Sussman, J. L., Moras, D., Sixma, T. K., and Perrakis, A. (2006) Co-expression of protein complexes in prokaryotic and eukaryotic hosts: experimental procedures, database tracking and case studies. Acta Cryst. D62, 1232–1242.

    CAS  Google Scholar 

  4. Berrow, N. S., Bussow, K., Coutard, B., Diprose, J., Ekberg, M., Folkers, G. E., Levy, N., Lieu, V., Owens, R. J., Peleg, Y., Pinaglia, C., Quevillon-Cheruel, S., Salim, L., Scheich, C., Vincentelli, R., and Busso, D. (2006) Recombinant protein expression and solubility screening in Escherichia coli: a comparative study. Acta Cryst. D62, 1218–1226.

    CAS  Google Scholar 

  5. Vincentelli, R., Canaan, S., Offant, J., Cambillau, C., and Bignon, C. (2005) Automated expression and solubility screening of His-tagged proteins in 96-well format. Anal. Biochem. 346, 77–84.

    Article  CAS  PubMed  Google Scholar 

  6. Moreland, N., Ashton, R., Baker, H. M., Ivanovic, I., Patterson, S., Arcus, V. L., Baker, E. N., and Lott, J. S. (2005) A flexible and economical medium-throughput strategy for protein production and crystallization. Acta Cryst. D61, 1378–1385.

    CAS  Google Scholar 

  7. Ausubel, F. M., Brent, R., Kingston, R. E., Moore, D. D., Seidman, J. G., Smith, J. A., and Struhl, K. (eds.) (1987) Current Protocols in Molecular Biology, John Wiley & Sons, New York.

    Google Scholar 

  8. Cornvik, T., Dahlroth, S. L., Magnusdottir, A., Herman, M. D., Knaust, R., Ekberg, M., and Nordlund, P. (2005) Colony filtration blot: a new screening method for soluble protein expression in Escherichia coli. Nat. Methods 2, 507–509.

    Article  CAS  PubMed  Google Scholar 

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Acknowledgments

The authors acknowledge the support of the Divadol Foundation, the Newman Foundation, The Israel Ministry of Science, Culture and Sport grant for the ISPC, and the European Commission Sixth Framework Research and Technological Development Programme “SPINE2-COMPLEXES” Project under contract No. 031220. The authors thank Joel L. Sussman and Israel Silman for their comments on the manuscript.

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© 2008 Humana Press, a part of Springer Science+Business Media, LLC

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Peleg, Y., Unger, T. (2008). Application of High-Throughput Methodologies to the Expression of Recombinant Proteins in E. coli . In: Kobe, B., Guss, M., Huber, T. (eds) Structural Proteomics. Methods in Molecular Biology™, vol 426. Humana Press. https://doi.org/10.1007/978-1-60327-058-8_12

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  • DOI: https://doi.org/10.1007/978-1-60327-058-8_12

  • Publisher Name: Humana Press

  • Print ISBN: 978-1-58829-809-6

  • Online ISBN: 978-1-60327-058-8

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