Skip to main content

Alzforum

E-Science for Alzheimer Disease

  • Protocol
Neuroinformatics

Part of the book series: Methods in Molecular Biology™ ((MIMB,volume 401))

Summary

The Alzheimer Research Forum Web site (http://www.alzforum.org) is an independent research project to develop an online community resource to manage scientific knowledge, information, and data about Alzheimer disease (AD). Its goals are to promote rapid communication, research efficiency, and collaborative, multidisciplinary interactions. Introducing new knowledge management approaches to AD research has a potentially large societal value. AD is among the leading causes of disability and death in older people. According to the Alzheimer’s Association, four million Americans currently suffer from AD. That number is expected to escalate to over 10 million in coming decades. Patients progress from memory loss to a bedridden state over many years and require near-constant care. In addition to imposing a heavy burden on family caregivers and society at large, AD and related neurodegenerative disorders are among the most complex and challenging in biomedicine. Researchers have produced an abundance of data implicating diverse biological mechanisms. Important factors include genes, environmental risks, changes in cell functions, DNA damage, accumulation of misfolded proteins, cell death, immune responses, changes related to aging, and reduced regenerative capacity. Yet there is no agreement on the fundamental causes of AD. The situations regarding Parkinson, Huntington, and amyotrophic lateral sclerosis (ALS) are similar. The challenge of integrating so much data into testable hypotheses and unified concepts is formidable. What is more, basic understanding of these diseases needs to intersect with an equally complex universe of pharmacology, medicinal chemistry, animal studies, and clinical trials. In this chapter, we will describe the approaches developed by Alzforum to achieve knowledge integration through information technology and virtual community-building. We will also propose some future directions in the application of Web-based knowledge management systems in neuromedicine.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 89.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 119.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Notes

  1. 1.

    Founding scientific advisory board members were Eva Brach, Joseph Coyle, Peter Davies, Bradley Hyman, Gerald Fischbach, Zaven Khachaturian, Kenneth Kosik, Virginia Lee, Elliott Mufson, Don Price, John Olney, and Robert Terry.

References

  1. http://www.alzforum.org/res/for/journal/detail.asp?liveID=35

    Google Scholar 

  2. Marchesi, V. T. (2005) An alternative interpretation of the amyloid Abeta hypothesis with regard to the pathogenesis of Alzheimer’s disease. Proc Natl Acad Sci USA 102(26):9093–8.

    Article  CAS  PubMed  Google Scholar 

  3. Protofibrillar A-beta in Alzheimer Disease, an Alzforum Live Discussion with Brian Cummings, Dean Hartley, William Klein, Mary Lambert, Dennis Selkoe, et al. (2000) Accessed at http://www.alzforum.org/res/for/journal/protofibrillar/default.asp

    Google Scholar 

  4. Berners-Lee, T. (1998) Semantic Web Road Map. Available at http://www.w3.org/DesignIssues/Semantic.

    Google Scholar 

  5. Berners-Lee, T., Hendler, J., and Lassila, O. (2001) The Semantic Web. Scientific American 284(55):28–37.

    Google Scholar 

  6. Hendler, J. (2003) Science and the Semantic Web. Science 299:520–521.

    Article  CAS  PubMed  Google Scholar 

  7. Clark, T., and Kinoshita, J. (2004) A pilot KB of biological pathways important in Alzheimer’s Disease. W3C Workshop on Semantic Web for Life Sciences, Cambridege, MA, USA.

    Google Scholar 

  8. Available at http://purl.org/swan/0.1/. Some browsers may require a “view source” operation to see the RDF.

    Google Scholar 

  9. Wikipedia: The Free Encyclopedia. Available at http://www.wikipedia.org.

    Google Scholar 

  10. Insel, T. R., Volkow, M. D., Li, T. K., Battey, J. F., Landis, S. C. (2003) Neuroscience Networks. PLoS Biol 1(1): c17 doi: 10.1371/journal.pbio.0000017.

    Article  Google Scholar 

Download references

Acknowledgments

We thank Yong Gao and Gabriele Fariello of the SWAN team at the MGH and members of the ARF team: Elaine Alibrandi, Tom Fagan, Donald Hatfield, Hakon Heimer, Sandra Kirley, Colin Knepp, Paula Noyes, Nico Stanculescu, Gabrielle Strobel, and Elizabeth Wu. We are grateful to the Ellison Medical Foundation for its generous support of the SWAN project and are indebted to an anonymous foundation for its unstinting support of the ARF.

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

Copyright information

© 2007 Humana Press Inc.

About this protocol

Cite this protocol

Kinoshita, J., Clark, T. (2007). Alzforum. In: Neuroinformatics. Methods in Molecular Biology™, vol 401. Humana Press. https://doi.org/10.1007/978-1-59745-520-6_19

Download citation

  • DOI: https://doi.org/10.1007/978-1-59745-520-6_19

  • Publisher Name: Humana Press

  • Print ISBN: 978-1-58829-720-4

  • Online ISBN: 978-1-59745-520-6

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics